Polyodon spathula (Mississippi paddlefish): 121314826
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Entry
121314826 CDS
T07273
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121314826
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
121314826
NCBI-ProteinID:
XP_041104461
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Position
4:72389535..72553204
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AA seq
834 aa
AA seq
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MKSNQERSNECLPPKKRDFPASNLPSDEKPLVAPASESQRGENLAWLANVASRQNNMGSG
RHSNTGIPAEAPDVALYKPLPNTVDYSSSARVPRTETTMATLPAVYSSTISQPGMPVSSL
QNSQLPHAFQFISSPYPGPYTSYIPSQLISPTATSAAAPCSQRSQLEAYTTAVMSQAQAS
KAEHHQHQQHHMVRTPGLIAPETPPPFAQPPNQYVQIAGSPSGIGRAVSSPPSHIPLHLH
SHPAVIPHALALSGNSQLVVHYTDGNLSACPPAKKLQEDGRTREVLNGELDKGRRYSLSH
EASLGKPNSGGKGSPHHHHHHQHQQHQQQQQHHHYETRHVVLPGEYNTQETSGIRTSLML
VPNSHASSSTDLEAIREQSPSSIAHIEKTGLCLGKPNSRSSSYTLSSPQLGTDGVKATAA
TLSPHTVIQTTHNATEQISMGLSAASYYPNAAQQPIIGYIAGSSQQQHQQAISYHTNLPQ
HLVIPGSQSLLIPVGGGSGDVEAGPTIVTSSLQFAAVPHTFVTTTVPFGAAETLVSQPST
TYHAAMVQAQIHLPMVQPMATATPPSVLTPPATSSSLPPYFMKGSIIQLANGELKKVEDL
KTEDFIQSAEVSSDLKIDSSTVERIEGSQNPSFAIIQFAVGEHRAQVSVEVLVEYPFFVF
GQGWSSCCPEQTTQLFNLPCIKLSVGDVCISLTLKNLKNGSLKKGQLVDPTGSLFLKPPK
NDSLHGSRVRYVEHENGVGQRGGGGTAGTIGTQTTSENGELKFLEKTGQMAGCRPLVIKT
EAGNKPTTRKRRWSAPESRKVEKWEEEPPLTLPRPSFIPQEVKISIEGLSNLGK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaccaggaacggagcaatgaatgcctgcccccgaaaaagcgtgatttccct
gccagcaacctgccatctgatgagaagccgttggtggccccagccagcgagagccagcgt
ggggagaacctggcctggcttgccaacgtggctagcaggcagaacaacatgggtagtggc
cggcacagcaacacagggatcccagccgaggcaccagacgtagccctgtacaaaccgctc
cctaacacggtggactattcctcttcagccagagttcctaggacagagactaccatggca
acgcttcctgctgtgtattcttcgactatctcccagccggggatgccagtctcttcattg
cagaattcccagctcccacacgctttccaattcattagctcgccctacccagggccttac
accagctacatcccctcacagctgatctctccgaccgcaacttcagccgctgcaccctgt
tctcaacgctcccaacttgaggcctataccactgctgttatgtcacaagcacaggcctcc
aaagccgagcaccaccaacaccaacagcaccacatggtccggacgcctgggctaattgca
ccagagacaccgccaccttttgcacagccacccaaccagtatgtccagattgcaggctca
ccttcgggcatcggcagagctgtctcctcccctccctcccacatcccgcttcacctccac
tcccacccagctgtcatccctcatgccctcgcccttagcgggaattcacaactggtggtc
cattacacagatggaaacctttctgcatgtcctcctgctaagaagctccaggaagacggg
cggacacgagaagttctaaacggcgagttggacaagggcagacgctacagcctgtcccac
gaggccagcctgggcaagcctaacagcgggggcaagggaagcccccaccatcaccatcac
caccagcaccagcagcatcagcaacaacaacaacaccaccattacgagacccgtcatgtg
gtactccctggtgaatacaacacacaggaaacctcaggcatacggacttcgctgatgctg
gtgccaaacagccatgcctccagcagcacagacttagaggcaatcagggagcagtcgcct
tcctcgatcgcccacattgagaagactgggctctgtctggggaagcccaattccagatcc
tcctcatacactctctcctcacctcagcttggcacagatggcgtaaaggcaacagctgcc
actctttctcctcacaccgttatccagaccacccacaacgccacagagcagatctcaatg
ggactatctgccgcgtcctactatcccaatgctgcccaacagcctatcattggctacatt
gccggcagtagccagcaacagcaccagcaggccatcagttaccacaccaacctgccgcag
cacttggtcatcccaggtagccagtctctactgatcccagtgggtggtggcagtggggat
gtcgaagccgggccaactatcgtgacctcatccctgcagttcgcagcagtgcctcacacc
tttgtcaccaccacagtcccattcggggctgcagagacactagtcagccagccctcaacc
acctaccacgcagccatggtacaggcacagatccacctgcccatggttcagcccatggcc
actgccacacctccaagcgtgctgacacctcctgccacatcctcctctctgcccccttac
ttcatgaagggctccatcatccagctggccaacggggagctgaagaaggtggaggacctt
aaaacagaggatttcatccagagtgctgaggtcagcagcgacctaaagatagactccagt
acagtggagcggatcgagggcagccagaaccccagctttgccatcatccagtttgcagtg
ggagagcacagagctcaggtcagtgttgaggttttggtggagtaccccttttttgttttt
gggcaaggctggtcttcatgctgcccagagcaaactacccaactgttcaacctgccctgc
atcaagctgtcagtgggagatgtctgcatctccctcaccctcaagaacctgaaaaatggc
tctctgaagaagggccagcttgtggatccgactggcagcctcttcctgaaaccaccaaag
aatgacagcctgcatgggagcagagtcaggtacgtggagcacgagaacggagtcgggcag
agaggaggtggtggtactgccggcacaatcggcacacagaccacctctgaaaatggagaa
ctgaagtttcttgaaaagacagggcagatggctggttgcagaccactggtcatcaaaaca
gaagctggcaacaagcccacaaccaggaagaggaggtggtcagcgccagagagccgcaaa
gtggagaaatgggaagaggagcctcctttgactcttcccaggccctcttttattcctcag
gaggttaagatttccatcgaaggtctatctaatttaggcaagtga
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