Polyodon spathula (Mississippi paddlefish): 121314833
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Entry
121314833 CDS
T07273
Name
(RefSeq) activity-dependent neuroprotector homeobox protein 2-like
KO
K24878
activity-dependent neuroprotector homeobox protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314833
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121314833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADNP_N
zf-C2H2_jaz
Homeodomain
zf-C2H2_fungi_2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
121314833
NCBI-ProteinID:
XP_041104473
LinkDB
All DBs
Position
4:complement(73179265..73200693)
Genome browser
AA seq
1011 aa
AA seq
DB search
MFQLPVVNLDKIRKSRKRVKEVLCDIGLQHCRELLEGVQSFDAGDQYFNNTTWWDLSESE
SHRRRKPRYRSNTFCCSQCKFCTKRLCAYKAHVLRCHEEDEDTETLAGCPVCPFASHPKV
INQHFRIFHTMPRKNLASQSVPNSDPAPLNAVDRFSCRKCFFQDSLYYCMKKHILVSHYP
TLLNSYYGQRSENEIASCRESGIPPLKFYCKICNLPADSSEALLYHILTSDKHRELEIHL
KALIHENTKTGKRNQMRVPQIAPKVKVSHQVLKLSMLSGTSGRQQQQQQQQQQMKTVSLQ
QNKPSQVMGPPRPPANTPGAVAAVAKAQLPSPPVSLTSPIHTPLGPPAIRTVPGGAATLI
RAPGSTQAFYPGGSTSALIQMATAAARSSLPSTSSVTINSLPFRRATATLPAPARVVTSL
VQASSHSGSTAVGSSKQNVSLQQQQRLTVVQTAVPLNKLGLQAPGTQPLVVSSQRLNQAI
SAVNQPRGAMLASQSLFSQLIPTGNKVNGLPTYTLAPVQVTMPLQSGSVQNLSALPVPVQ
IPQGNTVSKLQTTKPIQTVPCQPNTNSKQAKQWITCPVCNELFPSNVYQVHVGIAHKQSP
TNSSNVLHRLAARAPFLKKIKDKTLKCLLCKTLISEKGLFEHLLHGLNCLYCPAMFSSVK
QLVEHTNSEHNTKQKVNNDVLNKEYRLYTDDHGELVFPYFDLNTAASKEQVGDKEVHLAL
VTLTLEVIYIKVHIEAGRPVCRITQKAQTKDCPFCPEKFESSEEYELHLKIKHHIMPTIH
TILKTPAFKCIYCCGVYTGKTTAKAISVHVQRCRCAPKNTKDLERTFNPDCSIPTVVSVN
GGSQRLVVVPTKQDSQMTSSSQAENPGFQSNLRLEVARRDSADASARERELIATKRKRID
SDGGALSSTQEEPLVRLELDPTGFEMRAYEARKEFLNDYFNKKPYLSKNEVEVLASRLWI
NKTDVACHFGSKRTRCLKTIQKTKAVVLLGFNMCELKKVKHDLNVAELNDG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcttcctgtggttaacttggacaaaatccgaaaatctaggaagagggtaaaa
gaggttttgtgcgacattggacttcagcattgtagagagctgcttgagggagttcaaagc
tttgatgcaggagatcaatatttcaataacacaacatggtgggatctctctgaaagcgag
tcacataggagacggaagccaaggtaccgctccaacacgttctgctgcagccagtgcaag
ttttgtacaaaaagattatgcgcctacaaagcccacgtcctgcgttgtcatgaggaggat
gaggacactgaaactctggctgggtgccctgtctgtccatttgcttcccatcctaaagtc
atcaatcagcactttaggatctttcatactatgccacggaagaatctggcttcacagtct
gtacccaattctgacccggcgcctctaaatgctgtggatagattctcctgtcgcaaatgt
ttctttcaggactctttgtattactgtatgaagaagcacattttagtgtctcattatcct
accttactgaacagttactatgggcagcgatcagaaaatgaaattgcgtcttgtagggaa
agtggaataccccccctcaaattctactgtaaaatctgcaatttgcctgctgacagctcg
gaggctttgctatatcacatcttgacgtcagataagcacagagaactggagattcactta
aaagccttaattcatgaaaacacaaaaacagggaaaagaaaccagatgagggtcccacag
atagctcctaaggtgaaagtatctcatcaggttctgaaactctccatgttgtctggaact
agtgggcggcagcagcagcagcagcagcagcagcagcagatgaaaactgtttcacttcag
cagaataaaccatctcaagtcatggggcctcccagaccacctgcaaacaccccaggtgct
gttgctgctgttgcaaaagctcaacttccaagccctcctgtttctcttacaagtcctatc
cacacacctctgggtccaccagcaatccgtacggttcctggaggtgcagcaactctaata
cgtgctcctggcagcactcaagccttctacccagggggatcaacatctgctctcatacag
atggccacagcagctgctaggagctcattgccttccacttcgtccgtcacaatcaattct
ctgccttttagaagggcaaccgctaccttacctgctccagcccgagttgtgacgtccttg
gtacaggcctctagccactcagggtctactgctgtcggttcttccaagcaaaatgtctca
ttgcagcagcaacagcgccttactgtggtgcagacagcggttccacttaacaaattgggg
ttacaagcaccaggtactcagcccctcgttgtttcctcacaaagactgaaccaagcaatt
tcagctgtaaaccaacccagaggtgctatgctggcctcacagtctctcttcagtcagctg
attccaacaggcaataaagtgaatggcttacccacctacactctggcaccagttcaggtg
acaatgccattgcagtctggaagtgtgcagaacctttcagcgttaccagtgccggtgcag
atcccccagggaaatacagtttcaaagctccagacaactaagcccattcagacagtcccc
tgccagcctaatacaaactccaagcaggctaaacagtggataacttgccctgtgtgcaac
gagctgtttccctccaatgtgtaccaagtccacgttggaatagctcataaacagtctcct
accaatagcagtaatgtgctgcataggcttgcagcccgggcaccatttttgaagaagatt
aaagacaaaaccctcaaatgcctgctctgcaaaactttgatttcagaaaaaggacttttt
gaacatttgttgcatggcttgaactgcttgtactgccctgcaatgttcagctctgttaaa
cagttagtggagcacacaaattctgagcacaatactaaacaaaaagtaaataatgatgtc
ttgaataaggaatatcggctttatactgatgaccatggggaacttgtatttccctatttt
gatttgaacactgctgcatccaaagagcaagtgggggacaaagaagttcacctagctctt
gtcacattaactctggaggtcatctacattaaggtgcatattgaggctggtcggccagtt
tgcagaataactcagaaagcccagactaaagattgccctttttgtcctgagaagtttgag
agctctgaggaatatgaactgcatctgaagataaagcaccacataatgcctacaatccac
accattttaaaaaccccagctttcaaatgcatctattgctgtggtgtgtatacaggaaaa
actactgcaaaagcaatatctgtccacgtgcagcgctgtaggtgtgctcccaagaacacc
aaggatttagaaagaacattcaatccagactgcagcattccaacagtcgtgtctgtgaat
ggaggatcccagaggttagtcgtagtgccaacgaaacaagattctcagatgacttccagt
tcccaggcagaaaatcctggctttcagagtaaccttaggcttgaggtggcaaggagagac
tctgcagatgccagtgcgagagaaagagaacttatagctacaaaaaggaagaggattgac
tcagatggtggtgccctgtcttctacacaggaggagcctctagtgcgtctcgaacttgac
cccactggcttcgaaatgcgtgcctatgaggcccggaaagagttcctcaatgactatttc
aacaaaaagccgtacctgtccaaaaatgaggtggaagttcttgcatcccgcttatggatt
aataaaactgacgtggcttgccactttggttccaaacgtaccagatgcttaaaaaccatc
caaaaaaccaaggcagttgtcctgttaggatttaatatgtgtgaactaaagaaagtaaaa
catgacctaaatgttgctgaactgaatgatggttga
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