Polyodon spathula (Mississippi paddlefish): 121314835
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Entry
121314835 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314835
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121314835
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121314835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
Rad60-SLD
zf-C3HC4_2
zf-C3HC4
CoiA_N
Nop14
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121314835
NCBI-ProteinID:
XP_041104479
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All DBs
Position
1:complement(16596903..16677491)
Genome browser
AA seq
874 aa
AA seq
DB search
MWIQVRTIDGKETRTIDDLSRLTKIECLRLKIHESFNVSPEQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQADPPDSKGKKKDEVSVGGSSSGNKKSLNPLSDNQPSTSTRTFLI
DPGIGMYKINELVDCRDVSIGAWFEASIENVTRATKGHNGKASAKSSKMSKRTNGKLEID
QNHSSQDSNGKSSFILDSAPSTSYTDCLDNEDDVIYHIKYDDYPENGVVEMCADDVRARA
RTLLKWDHLRVGQMVMVNYNIEVPEERGFWFDAEITSLKEISRTNKEVRVKILLGGPEDV
INDCKLIFLEEIYKIEKPGAPPLTSADGQFKRKSGPECKHCKADPDSECRFCSCCVCGGK
QDAHMQLLCDECNMAFHIYCLNPPLSRIPEDEDWYCPTCKNDTSEVVKAGEKLKQSKKKA
KMPSAHTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTTWKFRVQVSEVGVHRP
HVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHM
NRALALNCDAPLNDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKY
WPEIGKCGFLVWRYLLRRDDLEPAPWTPEGLERTNKLGLSVQYPEGYLEAMANKVKKDRT
KRNSGKQEKKEKGEKQVEEKMKKKEEEEEEEKEEEEKEEKKEEDDEEEEEEEEEEEVEEE
EVVKLEPEAQSNGSRKRPQEKVIQEDEIPAKTTKLTDKGEAFQLSPQQQWLIKEDCLNKK
LWDEALCCLTEGPSFLRKVEEIFMCVCCHELVFQPVTTECLHNVCKTCLQRSFRAEVYTC
PACRHDLGKDYIMVLNKILQTLLDQFFPGYSKGR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggttcggaccatagacggcaaagagacccgaaccatagacgatctatct
agattaacgaaaattgaatgtttaaggttgaaaatccacgaaagcttcaacgtgagccct
gaacaacagagactgttttacaggggaaaacagatggaagatgggcagactctgtttgac
tacaatgtgggactcaatgacattgtgcagctgctgatccgctcgcaggcagaccctccc
gactctaaaggcaagaagaaagacgaagtcagcgtcggcggctccagttccggcaacaag
aaatccttgaatccgctgtcagacaatcagccctccacctccactcgcacgttcctcatc
gaccctggcatcggcatgtacaagataaatgagctggtggactgtcgggatgtgagcatt
ggggcctggtttgaagccagcatagaaaatgtgactagagccacaaagggacataatggc
aaggcttcagctaaaagttcaaaaatgagcaaaaggactaacggaaagctggaaatagac
caaaaccattcatcccaggacagtaatgggaaatcctcttttatcttggatagtgcacct
tccacctcttacacggactgcttggacaatgaggacgatgttatttatcatatcaaatat
gacgactatcctgaaaatggtgttgttgaaatgtgtgctgatgacgttcgggcccgtgca
cgaaccctgttaaaatgggatcaccttcgggttggccagatggtcatggtgaactacaac
attgaggttccagaagagcgaggcttctggttcgatgcagaaatcacctctttgaaagag
atctcgagaacaaataaggaagtcagagtgaaaatccttttagggggcccagaggatgtg
attaatgactgcaagctcatctttttggaggagatctacaagatagagaaaccaggggca
cctccactgacttctgcagacgggcagtttaaacggaaaagcgggccggagtgcaagcac
tgcaaggcggaccctgactcggagtgccggttctgctcctgctgcgtgtgtggcgggaag
caggacgcccacatgcagctgctgtgcgatgagtgcaacatggcttttcacatctactgt
ctcaatccaccgctcagcaggatccccgaggacgaggactggtactgccccacttgcaaa
aatgacaccagtgaggttgtgaaagcaggagagaaattaaagcagagtaaaaagaaggcc
aagatgccgtctgcgcacactgaaagccagcgagactggggcaagggaatggcctgcgtg
ggccgtacgaaggaatgcacaattgtaccttctaaccactatggacctatccctggcatc
ccagtcggaacaacatggaagttcagagtgcaggtgagtgaagtgggagtccacagaccg
cacgtgggaggaatccatggccgcagtaatgacggatcctattcactagtgttggctgga
gggtttgaagatgaagtggacaggggagatgaatttacctacactgggagtggaggtcga
gatctctctggtaacaaacgcattggggagcattcctttgaccaaacactgacccacatg
aacagggcgctggcactcaattgtgatgcacctctgaatgacaaggacggagcggagtcc
aggaactggcgggctggcaagcctgtccgcgtggtccggagctccaaggggcgccgcatc
agcaagtatgctcccgaagagggcaatcgatacgatggaatttacaaggtggtgaaatac
tggccagaaattgggaagtgtggtttcttggtttggcgttacttgctgagacgtgatgat
ttggagccagcgccttggacgccagaagggctggagaggacaaataaacttggcctgtca
gtgcagtatccagagggatatctggaagcaatggctaataaggtgaaaaaagacaggact
aagaggaattctgggaaacaagagaagaaggagaaaggagagaaacaagtggaggagaag
atgaaaaagaaggaagaggaggaggaggaggagaaggaggaggaagagaaggaagagaag
aaggaggaggatgatgaggaagaggaggaggaagaggaggaggaggaggtggaggaggag
gaagtggtgaaactggaacctgaagcccagagcaacggcagccggaagagacctcaggaa
aaagttatacaggaagatgaaatcccagctaagaccacgaagctgacagacaagggggaa
gccttccagctttctccacagcagcagtggctcatcaaagaggactgtctcaacaagaag
ctgtgggacgaggcactctgctgtctcactgagggaccgagcttcctgaggaaggtggaa
gagatcttcatgtgtgtgtgttgccacgagttggttttccagcctgtcacaacagagtgt
cttcacaatgtttgcaagacttgtttgcagaggtcttttcgtgcagaggtgtacacctgc
ccagcctgccgccatgacctgggcaaggattacatcatggtcctcaacaagatcctccag
accctgctggaccagttcttccctggctacagcaaagggcgatga
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