Polyodon spathula (Mississippi paddlefish): 121314839
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Entry
121314839 CDS
T07273
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121314839
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121314839
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121314839
Protein phosphatases and associated proteins [BR:
pspa01009
]
HAD phosphatases
Fcp/Scp phosphatases
121314839
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121314839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
Biotin_lipoyl
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
121314839
NCBI-ProteinID:
XP_041104483
LinkDB
All DBs
Position
4:complement(73400316..73550366)
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AA seq
967 aa
AA seq
DB search
MEDPADSGGGGTAASAGPSMLVTEIHCSAGARPLRLLEWKVKPGSHVNIDSVLAVCIPIS
LERQAGEEPQDPPSGQAKKKVKSDRAGVVRELCCQPGQVISPGGILVRIEECTHPVVMKG
LCAECGQDLTQLQTPISTANVSMVHSIPELMVSSEQAEQLGREDQHRLYRNRKLVLMVDL
DQTLIHTTEQHCKQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGS
RLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWK
FAPNLITVKKYVYFQGTGDINAPPGSKEAQMRKKANNVNKPNEVSEPASSAQESLEEVKV
SAVEEQSNGLRKRGKERNGTKNTSADDSSSKSTAANSQDRANERIHSGGEYSSAADASGV
YNSSSTEQDSGRTVTDKRSVKSSGDSVANDFDFDLSSDSESEHDSGAEKASSNSDSEGKN
KRAKKSESMQPDQNKSKINTVGENHSGEKQVDPEDQVCDIKLDNEQGSLGGLGNGCREKK
EAETESQNSEQSGLTIGESLDQSMEEEEEEEDLDKDDHLIYLEEVLTRIHMEYYARYDKY
LKKELPEAPDIRKIVPELKSKGLAGTIIVFSGLYPTSYPMERTRECYHAVALGAKISKHL
VLNAKDPNRTTHLIAARPGTEKVRQAQGYKHLHIVNPDWLWGCLERWERVEEQLFPLKED
YIKTQRTNSPATFPDIESAFQTPLFHPTPIHPKVEAGPEVRIYDPVTGKLIRKGPQSSRQ
SPYIQSPAPPITLPVHGEQSSFRVVQPHQHLGEEELQCSRLDDEQPGPSRRERQPSMSES
MPLYTLCKEDLESMDKEVDDILGEESDNESEEKTEEEEAGKNLPEGQNPGTVGTTVEEKP
TTSSSKEGNLTDSTPRGHKRKLEEAGDRDGNSSGESSKESSNEDEEGSSSEADEMAAALE
AELNDFI
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccggcggactctggtggcggcggcaccgcagcttctgcgggcccctccatg
ctagtgacagagatccactgttcggcgggggctcgtcccttgcggctgctggaatggaag
gtaaagcctggctcgcatgtgaacatcgactcggttctagcggtgtgtattcccatctcg
ttggagagacaggccggagaagagccccaggacccgccaagtgggcaggctaagaagaag
gtgaagtcggaccgggccggagttgtgagagagctatgctgtcagcctggacaggtcatc
tctccggggggtatattagttcgaattgaagaatgcacccatccggttgtcatgaaaggc
ctctgtgcagaatgtggccaggatctcacacaattgcaaacccccatatccactgccaac
gtgtccatggtccacagtatcccggagcttatggtcagctctgagcaagctgagcagttg
gggcgagaagaccaacaccggctatacagaaacaggaaacttgtgctgatggtagatttg
gaccagactttgatccatactactgagcaacactgcaagcaaatgtccaacaagggaatc
ttccactttcagcttggccggggagagccgatgctccacaccaggctacgtccccactgc
aaagatttccttgagaagatcgccaaactgtacgagttgcacgtttttacctttggtagc
aggttgtatgcacacaccatagcaggatttttagacccagaaaagaagctgttttcacat
cgaattctgtcgagagatgaatgcattgatcctttctctaaaacaggaaacctcagaaat
ctctttccatgtggcgactcaatggtttgtatcattgatgaccgagaagatgtgtggaag
tttgcaccaaacctcataacagtaaagaaatatgtctattttcaagggacgggggatatc
aatgcaccacctgggtctaaggaagctcagatgaggaagaaagcaaacaatgtgaataag
cctaatgaggtatcggagccagcatcatctgcccaggagtcgttggaggaagtaaaggtc
tctgctgtggaggaacagagcaacggcctcaggaaacgtggcaaagagcgaaacggcaca
aaaaacacgtctgcggatgactcttcctcaaaaagtactgctgcaaattctcaggacaga
gctaatgaaaggatacactcaggaggggagtacagtagcgcagcagacgcttctggggta
tacaactccagctccactgagcaggacagtggcaggacagttacagataagcgttcggtc
aaaagcagtggcgacagtgttgcaaacgactttgactttgacctgtccagtgacagcgaa
agtgaacatgattcaggggcagagaaagcctcctccaacagcgatagcgaagggaaaaat
aaaagagcaaagaaatcagagtctatgcagccagatcagaacaagagcaaaatcaacaca
gtcggggagaaccattccggggagaagcaggttgatcctgaggaccaggtttgcgacatt
aagctagacaatgagcagggtagcctggggggcttgggcaacggttgtagagaaaaaaaa
gaggcagagacagagtcccagaacagtgagcaatccgggttgactattggggagtctctg
gaccaaagcatggaggaggaggaagaggaagaagatctggataaagatgaccatttgata
tacctggaagaagtcctgacccgcatacacatggagtactatgccaggtatgacaagtac
ctaaagaaagagttacccgaggcacctgacatccgcaagatcgtccctgagctgaagagc
aagggcctggcagggacaataattgttttcagtggactgtaccccaccagctaccccatg
gagagaacacgggagtgctatcacgcagttgcccttggagcgaagattagcaaacaccta
gtgcttaatgctaaagatcccaacaggacaacgcacttgatcgctgctcgacctggtaca
gagaaagtaagacaagcccagggctataaacacctgcacattgtcaacccagactggttg
tgggggtgtctggagcggtgggagagagtggaagaacagcttttccctttgaaggaggac
tacatcaaaacacaaagaaccaacagccctgccacatttcctgacatcgaaagtgcattt
cagacgccattgttccacccaactcccatccatccaaaggtagaggctggcccggaggtt
cgaatctacgaccctgtaactgggaaactgatcaggaagggcccccagagctccaggcag
tctccgtacatccagtcgccagctcccccaatcacactgccggtgcacggagagcagtct
tccttcagggtggtgcagcctcaccagcacttgggtgaggaggagcttcagtgttcgagg
ctcgatgatgagcagccaggcccctcgcggagggagcgacagccgagcatgtcagagtca
atgcccctgtacaccctgtgcaaggaagacctggagagcatggacaaggaggtggatgac
atcttgggggaagagagtgataatgaaagtgaagaaaagacagaagaggaggaagcagga
aagaatctgccagagggacaaaatcctggaaccgtcggaacaacagtagaggaaaagcct
acaacatcatcgagcaaggaagggaacttgacagacagcacccccaggggccataaacgc
aaattagaggaggctggggacagagatgggaattccagtggtgaatcgagtaaggagtcg
agtaatgaagacgaagagggtagcagctctgaggcagatgaaatggctgccgcacttgaa
gccgaactcaacgacttcatataa
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