Polyodon spathula (Mississippi paddlefish): 121314840
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Entry
121314840 CDS
T07273
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04148
Efferocytosis
pspa04218
Cellular senescence
pspa04310
Wnt signaling pathway
pspa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121314840
04310 Wnt signaling pathway
121314840
04020 Calcium signaling pathway
121314840
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121314840
09143 Cell growth and death
04218 Cellular senescence
121314840
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121314840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314840
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121314840
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
121314840
NCBI-ProteinID:
XP_041104485
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Position
4:complement(73612272..73719566)
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AA seq
928 aa
AA seq
DB search
MQNNNSLSVSKFAFGPLVSSALAKELETLELHLLSSFTNMKSAEEEAFNYATPNVSISLP
LNMGNPCLSTYHSIHSSQVMSSNHQAGYMDNGASGYYLSPNFKPNGAPTLESPRIEITPY
IGMHHGNSQYPQEERIEESIPSAKRPNSIVTLTLPTADNYRDPSCLSPASSLSPRSCNSE
ASSYESGYSYNYDNSPQNSPWQSPCVSPKGTAPEEVYHRRLAACTLLTSPKHSPSTSPRT
SVTDENWLGTRNSRPTSPCGGKRKYSFNGVPYRHPSYSPHHSPTPSPQTSPQLSVTDETW
LNNTNQYTNSAIVAAINALTTDNMDMNDGIPVKSRKTNVDHMSLKVEPDEEEHSTVALSS
EDFSNRQMPFKKENFCGEFLSVPQNPYSWSKPKSYISPSLPALDWQLPSCSGPYELQVDV
QPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYMESEPLILQLFIGTADDRLLRPHAFY
QVHRITGKTVSTASHEVMLSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETD
IGRKNTRVRMVFRVHITQPNGRAISLQASSNPIECSQRSAQELPLVENQSMDSFPVTGGK
KMVLSGHNFLPESKVVFVEKAPDGHHIWEMDAKVDKDSIKSTSLVVEVPLYRNQMITSPV
QVNFYVCNGKRKRSQCQRFTYLPANVPIVKTEPTDDYEAIAPGLSTLSKSYYNQQVLTSM
MPPDPGSCLVDSFPSYQQRNIVMPSSSSTSNSSPKLHDLSPSTYTKYTGHSPLASLQQPT
VGVPTIQEVPNRSVVVHPNSPDQSSLIMLQSQVSQHLSSNCSHGYQQTLYPNSPTSSPVP
SAAQETLYGQTYSPPHPSLPMGQLKKTQQNGSPTNQPGSLLLLQEENSQTSLPVVVKQEP
QELDQMYLDDVNEIIRNDLSSTSLHGHA
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataataatagccttagtgtctcaaagtttgcatttggaccattggtttcttca
gctctggcaaaggaattggaaactttggaattgcatttattgtcttccttcaccaacatg
aaatctgcagaagaagaagccttcaactatgcaacacctaatgttagcatctccctgccc
ctcaacatgggaaacccctgcttgtcaacataccacagcatccattccagccaagttatg
tcttccaaccatcaagccgggtatatggacaatggtgcctcgggctactatctgtctcct
aacttcaagccaaatggagcccctaccttggaaagccccaggattgaaatcactccttac
atcgggatgcaccatggcaacagccagtacccccaagaagaacggattgaagaaagcatc
cccagtgctaagagaccaaactcaattgtcaccctgaccttgcccactgcagacaactac
agagatcccagctgccttagcccagccagcagtttgtctcccagaagctgcaattcagaa
gcctcttcctatgagtcaggctactcatacaattatgataactccccacagaactctccc
tggcagtcaccttgcgtttcccccaagggaactgctccagaggaagtctaccaccgcagg
ctggcagcctgcacactgctcacctctccaaagcactccccctccacatcccccaggacc
agcgtcacagacgagaactggcttggcacacgcaactcccggccgacctctccatgtgga
gggaagaggaagtacagctttaacggcgtcccctacagacacccctcctactccccacac
cattccccgaccccatcaccccaaacctcacctcagctcagtgtgaccgacgagacctgg
ctgaacaacaccaaccagtacaccaactccgccattgtggcggccattaatgctctgacc
accgacaacatggacatgaacgacggcatccctgttaagtccaggaagaccaatgtcgac
cacatgagccttaaagtggaaccagacgaagaggagcatagcacagtagccctgtcctct
gaagacttttccaaccgacagatgcccttcaaaaaagaaaacttctgtggggaattttta
tcagtgccacagaacccctactcctggtccaaaccaaagtcctacataagtccttctttg
cctgcacttgactggcagctaccgtcttgctcgggaccttatgaacttcaggttgatgtg
cagcccaaatcccatcaccgcgctcattatgagacagaaggaagccgaggagcggtgaag
gcatctgctggcggacatcctattgtgcagctccatggttacatggaaagcgagccgctc
atcctccagctgttcattgggacagcagacgaccgcctgctgcgaccacatgccttctat
caggtccaccgcatcactggcaagactgtctccacagccagccatgaggtcatgctctcc
aacaccaaggtgctggagatcccactgctacctgaaaacaacatgagagccataattgac
tgcgctggtatcctgaaactacggaattccgacattgagctgcgtaaaggcgagacagac
attggccgaaagaacaccagagtgcggatggtctttcgcgtgcacattactcaacccaac
ggccgggccatctctctgcaggcatcctccaaccccattgagtgttctcagagatctgcc
caggaactgccgctggtggagaatcagagtatggacagctttcccgtgacaggaggaaag
aagatggtgttaagtggacacaacttccttcctgagtcgaaggtcgtctttgtggaaaag
gctccagatggccaccacatatgggagatggacgcaaaagttgacaaggactcaatcaaa
tctacttcattagtggttgaagtccccctgtaccgaaatcagatgataaccagtcccgtc
caggtgaatttttatgtctgcaatggaaagaggaagagaagccagtgccagcgcttcacc
tacctgccagctaatgttccaatagtaaaaacagaacctactgacgactatgaggccata
gctcccggactaagtacattatccaaatcttactacaaccagcaagtcctgacctccatg
atgcctccggatcctggctcctgtctggtggacagcttcccttcctaccagcagagaaac
attgtgatgccatcctcttcgtccacctctaactcaagtcctaagctgcatgacctctcc
ccttccacttacaccaaatacaccggtcacagtccgctagccagtctccagcagcccaca
gtaggcgtccccacaatccaggaagtgcccaacaggtctgtggttgtgcaccccaactcc
cctgaccaatcatctctcatcatgctgcagtcccaggtgagtcagcatctgagcagtaac
tgttcccatggttaccaacaaacactctatcccaacagtcccacttcttctccggttccc
tctgctgcccaggagacactttatgggcagacctacagcccacctcacccctccctgccg
atggggcagctgaagaaaactcagcaaaatgggtctcccacaaaccagccagggtcactg
ctgctcttgcaggaagagaatagtcagacctcattgcctgtcgttgtcaagcaggagcct
caagagctggaccagatgtacttagacgatgtaaatgaaattataaggaatgatctctcc
agcacttccctccatggccatgcatag
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