Polyodon spathula (Mississippi paddlefish): 121314845
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Entry
121314845 CDS
T07273
Name
(RefSeq) sal-like protein 3 isoform X1
KO
K19871
sal-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314845
03036 Chromosome and associated proteins [BR:
pspa03036
]
121314845
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121314845
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121314845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_11
IZUMO
zf-Di19
zf-C2H2_2
zf-C2H2_6
B129_C2H2-zf
UBZ_FAAP20
zf-H2C2_5
Zf-C2H2_ZNF451
DUF2225
Motif
Other DBs
NCBI-GeneID:
121314845
NCBI-ProteinID:
XP_041104491
LinkDB
All DBs
Position
4:complement(73937661..73959387)
Genome browser
AA seq
1281 aa
AA seq
DB search
MSRRKQAKPQHLKSEEQALATEVVSEDAVPQEGVDDADSGNESRSGSEETHICDKCCAEF
FKWPDFLEHQKNCTKNPLVLIVNEDEAAPDPEEFLTEPSPVHSCPSEPADSEAAEESSPI
TESNESSEVVKSTEKEDEPMEVELSSDKEAQKDPGSSETPAFLPQLPNPSFVTNYNMPST
NVTLETLQSTSVAVAQFSQSSRTGANTGATTMAIPMILDQLIALQQQQIHQLQLIEQIRS
QVAMMNRQPMQPPLNPVVASQGASLTTVNQLKLPGFIAPPLHQLPAPVLSAVTGQASGPI
PSTLDGPQQHVSCSANQGMPNRVSVSAEPSLPPTSCNVIPSLVTPCTITNTSNSSTQPKN
ASTPPSIGHRSLLSPSSSLALLPQSSSSSVIFPNPLVSIAATANALDPLSALMKHRKGKP
PNVSVFDTKPSSEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKG
NLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTSSGIPYGMTLPPEKPVTTWLDSKPVLST
VPNSVGLQLPPTLPGMGSYNDSPSITPLNRSPQRPSPTSSECASLSPNLTNTESNVLAAP
ESPQQTLGNLAPPVLKPEGIHLPPSCTTRPGENPTTTGQAVFSASNTTSTTVTTVATTTV
IVTEPSTPPASIFNPVLPMISDQFKANFPFSGLLDSMQTSETSKLQQLVENIDKKMTDPN
QCVICHRVLSCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLKTHFGVHRAKPPLRVQH
SCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGFQDSMDTELSFDEKSIDAMSNYDDE
MMDENSMEEEGDLKEMESDSFKPLQSYSGSSPTSPPSVISSIAALENQMKMIDSTMSMNY
NFGLKSTENGFMESDHLTNDSFSIVGDLESQSADSPAMSESSNSMQALSPTLSSSESPKY
KSPGFNNHEEQQEEHAIVKSEKAETPSPTPENGGALDLTATQPSRPVIKEEVPFSMLFLS
RERGPSQSTPSLVTNTAPSMIKIEVNGHNKPTSLSEGPHFPVGIQVPAAPHTVMSPSITP
MLAPPPPRRTPKQHNCHSCGKNFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVH
MGTHMWNNAPARRGRRLSVENPMALLGGDAMKFTEIFQKDLAARAMNVDPSFWNQYAAAI
TNGLAMKNNEISVIQNGGIPQHPVILGGGGIPSLNSFTSGMDRARTGNSSPVTGFDKTNV
DTGGNRPFSRFTEDNKEIGIN
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccgcaagcaagcaaagccccagcatctgaaatcggaagagcaagcactagct
accgaggtagtttcagaagatgcagtcccacaggaaggagtggatgatgcagacagtgga
aatgagagtagaagtggcagcgaagaaacacacatttgtgataagtgctgcgctgaattt
tttaagtggccagacttcttggagcaccagaagaactgcacaaagaaccctctggtgctt
atcgtgaatgaggacgaggcggctccagaccctgaagagtttctgacagagccttcccct
gtccacagctgccccagtgaaccagcggacagtgaggctgccgaggagagtagtccaata
acagagagcaatgaaagctctgaggtagtaaagagcaccgaaaaggaagacgagcccatg
gaggtggaactatcgtccgacaaagaagcgcaaaaggatccaggttcttcagaaacccct
gcttttctacctcagcttccaaacccatcttttgtgacaaactataacatgccaagcact
aatgtgactttagagactttacagagcactagcgtagcagttgcacagttctcacagagt
tctcgaactggtgcaaataccggggcgaccaccatggccatccctatgatactggaccaa
ttgatagcccttcagcagcagcagatccaccagttgcagctgattgaacaaatccgcagt
caggtggcaatgatgaaccgacagccaatgcaaccgcccctgaacccagttgtagcttcc
cagggggcttcactgacaactgtcaaccaacttaaactcccaggcttcattgcccctcca
cttcatcagttgccagctccagtgctgtctgcagtcactggacaggcatctggtcctatc
ccatccaccttggatgggcctcagcaacatgtttcatgttcagctaaccaaggcatgccg
aaccgcgtatctgtttcagctgaaccaagcctgcccccaaccagctgtaatgtgattccg
tctcttgttactccttgcaccatcacaaacacaagcaacagctccacacaaccaaaaaat
gcttcaacccctccctcaattggacacagaagcctgctcagcccatcttccagcttggca
ctactacctcagagctcctcaagtagtgtgatcttccccaaccctttagttagcattgca
gccactgccaatgccctagatcctctctccgccctcatgaagcatcgtaagggaaagcca
cccaacgtgtcagtgtttgacaccaaacccagttcagaagacccgttttttaaacataaa
tgcaggttctgcgccaaggtctttgggagtgacagtgctttgcagattcatctgcgttct
catactggagagaggcccttcaaatgtaacatttgcgggaaccgtttctccaccaaagga
aacctaaaggttcactttcagaggcataaagagaagtaccctcacatccagatgaacccc
tacccagtaccagaatacctcgacaatgtacctactagctctggcatcccctatgggatg
actttgccacctgaaaagccagtgacaacatggctggatagcaagcctgtgttatcaaca
gtcccgaactcggttgggctgcagttgcctcctactcttccaggcatgggtagctacaac
gattctccaagtattactccattgaacaggtcaccgcaaaggccctctcccacttcaagt
gaatgtgcttcgttatcaccaaatcttaccaacacggaatccaatgttttagcagctccg
gaatctccccaacagacccttggtaatttggctcctccagttcttaaacctgagggaatt
cacctgccacctagctgcacaacaaggccaggggagaaccccaccacaactggccaagca
gttttttcagcttccaacactactagtactactgttactacagttgctactactacagta
attgttacagaacccagcacacctccagcaagcatcttcaatcctgtacttccaatgatt
tctgatcagttcaaggcaaattttccattcagtggtctactagactctatgcaaacctca
gagacatcaaagctgcagcagttagtggagaacattgacaaaaaaatgacagatccaaac
cagtgtgtcatttgccaccgtgtactcagttgtcagagtgccctgaagatgcactatcgc
attcacacaggagaaaggccatttaaatgtaaggtctgcggccgtgccttcaccaccaaa
ggcaacctgaaaacacactttggagttcacagagcaaaaccaccactaagagtgcaacat
tcctgtcccatctgccagaagaaattcaccaacgctgtggtcctgcagcaacatattcgt
atgcatatgggagggcagattcctaacacccctttaccagagggtttccaggacagcatg
gacacagaactttcctttgatgagaagagcattgacgccatgagcaactatgatgatgaa
atgatggatgagaactccatggaagaagaaggggatttgaaggaaatggaaagtgattct
tttaagcctttgcagtcttactctggttcatcacccacctctcccccttctgttatttcc
agcattgctgcactggagaaccagatgaaaatgattgactccactatgagcatgaactat
aattttggactgaaatctactgaaaatggattcatggagagtgatcatttgaccaatgac
tctttctcgattgtgggtgatcttgaaagccagagcgcagacagtcctgctatgtcagag
tcctccaactctatgcaggccttgtcccctactcttagtagctctgagagtcctaagtac
aaatcaccaggattcaacaaccatgaagagcaacaggaggagcatgctattgtaaagtca
gaaaaagctgaaaccccctcacccacacccgagaatggaggcgcactagatctgacagcc
acccaacccagcagacccgtcatcaaagaggaggttccttttagcatgctgttcctgagc
agagaacgtggtccaagccaaagcactcctagcctggtcaccaacacagcgcccagcatg
atcaaaattgaagtgaatggtcacaacaagccgacctccctaagtgagggcccacacttt
ccagttggtatccaggttccagctgcaccccatacagtgatgagcccaagtatcactccc
atgctggcaccgccgccaccgcgccggacacccaagcagcacaactgtcattcctgtggg
aagaacttctcctcagcaagtgctctgcagatccatgaacgcactcacactggtgaaaaa
ccttttggttgcacaatctgtggtagggcttttaccactaaaggaaatcttaaggttcac
atgggaacccacatgtggaataatgctcctgctaggcgaggtcgcagactgtcagtggag
aacccaatggcactattgggaggtgatgccatgaagttcaccgagatttttcagaaggat
ctggcagcaagagctatgaacgtcgaccctagtttctggaaccagtacgctgcagctatc
accaacggcctggctatgaagaacaatgaaatatctgttatacaaaacggaggcatcccc
caacaccccgttattctgggcggtggtggaattccatcgttaaatagtttcacaagcgga
atggacagggcacgcactggcaacagttcgcctgtgactggttttgacaagacaaatgta
gatacgggaggaaatcgtccattttctaggtttactgaagataataaagagattggtatt
aactaa
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