Polyodon spathula (Mississippi paddlefish): 121314878
Help
Entry
121314878 CDS
T07273
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314878
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121314878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
HTH_71
zf-C2H2_2
zf-C2H2_7th_ZNF462
CHX17_C
Motif
Other DBs
NCBI-GeneID:
121314878
NCBI-ProteinID:
XP_041104541
LinkDB
All DBs
Position
4:76504313..76521342
Genome browser
AA seq
956 aa
AA seq
DB search
MASKRKSTTPCMVLPMQTEEQYPDLDMEEGLEVQTEVPVENPVAVAAENVSSEEDVPETD
NLLDTDSKRIEGGYECKYCSFQTTDLNMFTFHVDSEHPTVVLNSSYVCVECNFSTKRYDA
LSDHNLRYHNKDDSFMLTMVKRNNQTVFEQTVNNLTFDGNFVQQVREDAMAVGIPFSKTP
IMKMKNKAEPKRIAVTPKAAGDLEVHEESESEQEAKEVPAVDMPDIDMPAIDIPAAVMPA
LDTAAIMPTLDMPAVITSAVLKPTVDTQAVSTVGLSMPSPVEMPVPPAPEEPAKPSVVIN
PPPQDLNKTIINTATVLPAGLAQVLSALQNQQSSRTQVLIPVSSIPTYNGCMDNNAVLVN
TYNKFPYPTLSEIVGLSFQTKFTEEQIKIWFSAQRLKHGVSWTPEEVDEARRKHFNGTVH
TMPQTITVIPAHLSGDRNGLQPILQTCQIVGQPGLVLTQVGGANPMPVTTPITLTVAGVN
NQVQLPKPATQVTPATMETKSAPTVQPPLLTPQENSALGPDFFGLRPKKSKEQLAEMKAS
YLKQPHPSDGEIARLMRLTKLTKGEIKKWFSDTRYNQRNSKNNHLTVFNENNSTSSSTTI
VIDSSDETTESPVSGPIREPRKQSWNPFPDFTLQKFKEKTAEQLQVLEESFQKSTTPTDD
ELNRLRSETKLTRREIDAWFTEKKKAPESGETKHEQMESEIAKVTVAIKTETQTPSSSGK
AKSGRDKSGKKTPEQLHILKSAFVRTQWPSSAEYEKLSEESGLPRAYIVSWFGDTRYAWK
NSNLKWYYYYQSGNIGAINGSGYRRRGRGRSKGRGRGRPRGRTRVMKRSASWSRSSPVMK
FKMGKDILKEYYLKHKFLNEQDLDELVSKSNMGYEQVRDWFAEIRRREDMGADLFDDSGE
NEEPEEESQEENQVTVGGGEGHVAGGGLDEDDDETDDSDTWEPPRHVRRRLSRSDD
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagagaaaatccacaacaccatgcatggtcctcccaatgcaaactgaggag
cagtacccagatctggacatggaggaagggcttgaggtgcaaactgaagttcctgttgag
aatccggttgctgttgctgcagaaaatgtttccagtgaggaggacgtgcctgaaacagat
aatttattagacacagattcaaaaaggattgaaggaggctatgagtgtaaatactgcagc
tttcagacgacagatctcaacatgtttacatttcatgttgattctgagcatccaactgtg
gttttgaactcttcttatgtctgtgtggaatgtaacttttcgaccaagagatatgatgcc
ctctcggaccacaacctacgctaccacaacaaggatgacagtttcatgctgacaatggtg
aaacgcaacaaccagacagtctttgagcagacggtcaataacctcacctttgatggcaat
tttgtgcagcaggttagagaagatgcgatggcagtgggaattccattcagcaaaacccca
ataatgaaaatgaagaacaaagccgagcccaagaggattgctgtgacacctaaagctgct
ggtgaccttgaagtccacgaagaaagtgaaagtgagcaagaggctaaagaagtgccggct
gttgatatgccagatatcgatatgccagctatcgatatacctgctgcagttatgccggct
cttgatacggcagctattatgcccactcttgatatgccagctgttattacgtcagctgtt
cttaagcccactgtcgatacacaagctgtatctacagtaggcttaagtatgcccagtccg
gttgaaatgcctgtaccaccggcaccggaggaacctgcaaagccaagcgttgtcatcaac
cctccgccacaggatttaaacaagacaataatcaatactgccacagttctccctgcaggg
ttggcccaggttctgtctgctctgcagaaccaacaaagctccagaactcaagttttgatc
cctgtcagcagcattccaacctacaatggctgtatggacaacaacgctgtgctggttaac
acctacaacaaattcccttacccaacactatctgagattgtggggctgtcattccagacc
aagttcacagaggagcagataaagatctggttttccgcccagcgccttaagcatggagtt
agttggacgccagaggaggtggatgaggccaggagaaagcatttcaatggcacagtgcac
accatgccacagaccatcacagtcattccagcacacctctcaggcgacagaaatggtctc
cagcctatccttcagacctgccaaatagtaggtcagccaggccttgttctgacacaagtt
ggtggtgcaaaccccatgccagtaaccactccaatcactctgacagttgctggtgtcaac
aatcaagtacagctgccaaaacctgccacccaggtgaccccagccactatggaaaccaaa
agtgctcccactgtccaacctcctctactgactcctcaggaaaactctgccctgggccct
gacttcttcggtttacgtccaaaaaagtctaaggagcagctagccgagatgaaggccagc
tacctgaagcaaccgcaccccagcgacggggaaattgcccggctcatgagattgacaaaa
ctcacaaagggagagatcaagaagtggttcagcgacacaaggtacaaccagcgcaattca
aagaacaaccatcttactgtgttcaatgaaaacaacagcaccagcagcagcaccaccata
gtgattgactcaagtgacgaaactacagagtcccccgtgtctggtcccatcagggagcca
cgtaaacagtcttggaaccctttccctgactttaccctacagaagttcaaggaaaagaca
gccgagcagcttcaggttctggaggaaagttttcagaagagcaccacaccaacagatgat
gaactgaataggttgagatcagagaccaagctaaccagacgagagattgatgcttggttc
acggaaaagaaaaaggcaccagaatcgggggaaacaaaacacgaacagatggagagtgaa
atagccaaagttactgtcgctatcaaaacagagacacagactccgtcttccagtggcaaa
gccaagtctggcagggacaagagtggcaagaagaccccggagcaactacatatcctgaag
agtgcatttgtgcgtacacagtggccctcatcggctgagtatgaaaagctgtctgaggaa
agtggcctgcccagggcctacatcgtcagttggtttggggacacgagatatgcctggaaa
aatagcaacttgaagtggtattattactaccagagcggcaacattggcgctattaatggg
agtggatacaggaggagaggaagaggaagatcaaaaggcagggggcgaggaaggcccaga
ggaagaacaagggttatgaagcgttcagctagctggagcaggtcctccccggtgatgaag
ttcaagatgggaaaagacatccttaaagagtattatttgaagcataaatttctaaatgaa
caagacctggacgaactggtttcaaagtctaacatgggctacgagcaggtccgggactgg
tttgcagagattcggaggcgagaggacatgggtgcagatctgtttgatgacagtggggaa
aatgaggagccagaggaggaatcgcaggaagaaaaccaagtgacagttggtggaggagaa
ggtcatgttgctgggggtggtttagatgaagacgacgatgaaacagatgatagtgacacc
tgggagccgccacgacatgtcagacgaaggctgtctagatcagatgattag
DBGET
integrated database retrieval system
