Polyodon spathula (Mississippi paddlefish): 121314928
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Entry
121314928 CDS
T07273
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121314928
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121314928
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
121314928
NCBI-ProteinID:
XP_041104631
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All DBs
Position
4:complement(80948364..80956412)
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AA seq
231 aa
AA seq
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MATLLARLFFFTWLIVPFCETEKARQRALRQRDAEYIERYNGCMQGPAGTPGRDGNPGAN
GIPGTPGFPGRDGLKGEKGECIRESFEEPWKPNFKQCAWKSLNYGIDLGKIAECTFTKMR
TDSALRVVFSGSLRLKCKNACCQRWYFTFNGAECTGPLPIEAIIYLDQGSPEFNSTINIH
RTSSVEGLCEGIHAGLVDVAVWVGICQDYPHGDASTGWNSVSRVIIEELPK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggccactcttctggctcgactgttcttttttacctggctaatcgtgcctttctgtgag
accgaaaaagcgagacagcgagctcttcgccagagggatgccgagtatattgaaagatat
aatggctgcatgcagggcccagctggcacccctggtagagacgggaaccctggagcgaat
ggcatccctggcacaccgggcttccctggtcgtgatggactgaaaggggagaagggggag
tgcataagggagagctttgaggagccatggaaaccaaacttcaagcagtgtgcatggaag
tcccttaactatggtattgaccttggcaaaattgcagaatgtactttcacaaagatgcgc
accgacagcgctctgagggtagtcttcagtggctctctgagactcaaatgtaaaaatgcc
tgctgccagcgctggtacttcacatttaatggggcagagtgcacaggacccctgccaatt
gaagccattatctacctggaccaaggcagccctgagtttaactccactataaacatacac
aggacctcttcagtggaagggctgtgtgaagggatccatgccggcctggtggacgttgct
gtgtgggttggtatttgtcaagactatcctcatggagatgcttccactggctggaattcc
gtgtctagagtcatcattgaagaactccccaagtga
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