Polyodon spathula (Mississippi paddlefish): 121314999
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Entry
121314999 CDS
T07273
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121314999 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121314999 (abcb4)
04147 Exosome [BR:
pspa04147
]
121314999 (abcb4)
04090 CD molecules [BR:
pspa04090
]
121314999 (abcb4)
Enzymes [BR:
pspa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121314999 (abcb4)
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121314999 (abcb4)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121314999 (abcb4)
CD molecules [BR:
pspa04090
]
Proteins
121314999 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
Rad17
AAA_16
Zeta_toxin
AAA_28
AAA_5
AAA_30
AAA
PRK
G-alpha
AAA_15
AAA_24
AAA_29
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121314999
NCBI-ProteinID:
XP_041104759
LinkDB
All DBs
Position
4:84491636..84525157
Genome browser
AA seq
1270 aa
AA seq
DB search
MNGETNATLNEKVENTNHVDTSEKKVKKKEPELPMVSPISMFRYADSVDILLMVLGTLMA
VAHGAAMPAMVIVFGDMTDSFVSDSIAGQTNFTWPQSNETLEQQMTSFAYYYTGLGAAVL
LAAYMQISFWTLAAGRQIKKLRKKFFHAVVRQEIGWFDVNEIGELNTRLTDDISKINEGI
GDKIALLIQSVATFLGGFIVGFVEGWKLTLVIMAISPVLGVSAAVFSKVLTSFTSKEQAA
YAKAGAVAEEVLSSIKTVMAFGGQKKELERYHVNLEDAKNVGIKKALSANISIGFCFFII
YASYALAFWYGSTLILDEGYTIGKVLTVFFAVMIGAFAVGQTSPNIQSFASARGAAHKIF
HIIDSEPKIDSFSDSGYKLDQIKGNIEFQNVHFTYPSRPDSKVLKGVNLKVSSGQTIALV
GSSGCGKSTTVQLLQRFYDADEGTITIDGNDIRSLNVKCLRENIGVVSQEPVLFATSILE
NIRYGREDVSLGEIEAATKEANAYDFIMKLPNKFETLVGNRGTQLSGGQKQRIAIARALV
RNPKILLLDEATSALDTESEAIVQMALDKVRKGRTTIVVAHRLSTIHNADIIASFENGVI
TDQGTHSELMSRMGVYQTLVTMQTYTNKDEGLDAAEEAVEDEKSPSMVSLTESTLFRRSS
SRESGKTTEKDLENKDDEKVPRVSFFNVLKLNKTEWPYLVLGTFCALVNGGLQPAFAIIF
SKIIGVFAETDRDVLQYKSTMFSLFFLAIGGISFFSIFFQGFCFGKSGEILTMRLRFRAF
KAMLRQDLGWFDDPKNSTGALTTRLATDAAQVQGATGSRLATFVQNTANLGTAVIISFIY
GWQLSLLILALVPVLAVAGVVQMKMLSGHAEKDKKELEVAGKIATETMENIRTVVSLTRE
RKFESIYEENLVVPYRNSQKKAHGYGLTFAFSQAVVYFAYAGCFRFGAYLVTKKIMNFED
MFLVISALVFGALALGEANSFGPNYAKAIVSASHLFMLLNRVPAIDNDSEEGDQLKQVEG
NIKFEDVIFNYPSRPDMQILQGLSLKVKRGQTLALVGSSGCGKSTTIQLLERFYDPLKGK
VMLDNCNMKELNIQWLRAQMGIVSQEPVLFDCSIAENIAYGDNSRKVTQEEIVAAAKAAN
IHSFIEGLPDKYNTQAGDKGTQLSGGQKQRVAIARALVRNPKILLLDEATSALDTESEKV
VQEALDNAREGRTCIVVAHRLSTIQNADKIAVFQNGQVVELGTHQQLLSKHGVYHALVNI
QMQQMNSHEN
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaaacgaacgccactttgaatgaaaaagtagaaaacacaaatcatgtggac
acaagtgaaaagaaagtcaagaaaaaagagcctgaactaccaatggtcagtcccataagt
atgtttcgctatgcagactcggtggatatactgctaatggtcctgggcacacttatggca
gtagctcatggggccgccatgcccgccatggttatagtgtttggagacatgacagacagt
tttgtttctgattccattgcaggacaaacaaattttacttggccacaatcgaatgaaaca
ttggaacaacaaatgacaagttttgcctattactacacaggactgggggcagcagtttta
cttgctgcctacatgcagatttccttttggaccctggctgcaggcaggcagataaagaag
ctgaggaaaaagttcttccatgcagttgtgcgacaagaaataggatggtttgatgtgaac
gaaataggagagttgaacacacgtctgacagatgacatttccaagataaatgaaggaatt
ggtgataaaattgccttgcttatccagtcagtggctaccttcttaggtggattcattgta
ggctttgtagaaggatggaagctgactttagttattatggcaatcagtccagtcctggga
gtgtcagctgctgtcttctccaaggtcttgactagttttactagtaaagagcaagcggcc
tatgcaaaagcaggagcagtggctgaggaggtgctgtcgtccatcaagactgtgatggct
tttgggggacaaaaaaaagagttagaaaggtatcacgtaaatttagaagatgccaagaac
gttggaataaagaaggctctctctgcaaacatctcaatcggcttttgcttctttatcatc
tacgcgtcctacgcgctggctttctggtatggaagcacacttattctagatgaagggtac
accattggaaaagtactaacggtcttctttgcagttatgattggagcttttgcggttggc
caaacatctccaaatatccaatcatttgccagtgcaagaggagcagctcataaaatattt
cacatcattgacagtgaaccgaaaattgatagtttttcagacagcggatacaagctagat
caaatcaaaggaaatattgaattccaaaatgtgcattttacatacccatcacgaccagat
tctaaggtattaaaaggtgtgaacctaaaggtcagcagtggccagacaattgcactggtt
ggtagcagtggctgtgggaaaagcacaacagtccagctgcttcagaggttttatgatgct
gatgaaggaacaattactattgatggaaatgacattcgatccttgaatgtaaaatgcctc
agggaaaacatcggagtggtgagccaggagcctgttctttttgccacctctattttagaa
aatatccgctatgggagggaggacgtgtccctgggtgagattgaagctgccacgaaggaa
gcaaacgcatacgatttcatcatgaaactacccaataaatttgaaaccttggttggcaac
agaggcacgcaacttagcggaggtcagaaacaaagaatcgccattgctcgagctctggtc
cgcaatcccaagattctcctgttggatgaagcaacctcagcactggatactgagagcgag
gcaattgtgcagatggcactggacaaggtcagaaaaggcaggaccactatagtagtggcc
catcgcctgtctacaattcacaatgcagacattatcgctagctttgagaacggagtgatc
acagaccaaggcactcatagcgagctgatgagcagaatgggggtttaccagacccttgtc
actatgcagacatacacaaataaagatgaagggctggatgctgcagaggaggctgtggaa
gatgagaagagcccttccatggtatcattaactgaatcgacactgttcagaagaagttca
agccgagagagtggaaaaacgacagagaaggatctggaaaacaaagatgatgaaaaggtg
ccacgggtgtcttttttcaatgtcctcaaactcaacaagactgagtggccctatctagtt
ttaggaaccttctgtgcgttggtgaatggaggtctccaacctgcttttgccattatcttt
tccaaaatcataggggtttttgctgaaacagacagagatgtattgcaatacaaatccaca
atgttctccttattctttttagcaattggtgggatttcatttttcagcatattctttcag
gggttttgctttggaaaatcaggggaaattcttacaatgagacttcgatttagggcattt
aaagctatgctgcgacaggaccttggctggtttgatgaccctaagaacagcaccggtgcc
ttgacgacgagacttgcaactgatgcggctcaagtgcaaggagctaccggttctaggctg
gctacctttgttcagaacactgccaaccttgggacagccgtgatcatttcattcatctat
ggctggcagctctctctcctcattctagcgcttgtaccagtgttggctgttgcaggagtc
gtacaaatgaaaatgctttcggggcatgctgagaaggataaaaaggaactggaagttgct
ggaaaaatcgccacagaaaccatggagaatattcgaaccgttgtttcattgaccagagaa
agaaagtttgagtctatctatgaggaaaaccttgtggtcccttacagaaattcacagaaa
aaggctcatggctatggcctgacttttgccttttcccaggcagtcgtatactttgcatat
gctggctgcttccgttttggcgcctacctggtgacaaaaaagattatgaattttgaagac
atgtttctggtaatttcagcccttgtgtttggagctcttgcattaggagaggccaattcc
ttcggtcccaactatgccaaggccatagtatctgcttcccacttgtttatgctgttaaac
agagttccagccatagacaacgactctgaagaaggagaccagctgaaacaagttgaaggg
aacatcaagtttgaagatgtgatattcaactacccttcccgccccgacatgcaaatattg
caggggctcagtttaaaggtgaagaggggacagactctggcactggtgggtagcagtggc
tgtgggaagagcaccaccatacagctgctggaaaggttctatgatccactgaaaggcaaa
gtgatgctggacaactgcaatatgaaggagcttaatatccagtggctccgggctcaaatg
ggtatcgtatcccaggagcctgtgctgttcgactgcagcatcgcagagaacattgcctat
ggtgataatagcaggaaggtgacccaggaggagatcgtggcagcagctaaggcagccaac
attcactccttcattgaaggtctacctgacaaatacaacacccaagctggtgacaaaggg
actcagctctctggtggacagaagcagcgtgtggcaatcgcccgggcgcttgtccgaaat
cctaaaatcctgctcttggatgaagctacatcagcactggacacagaaagcgaaaaggtt
gtgcaagaggccctggacaatgctagagaaggccgcacatgtattgttgtagcacatcgg
ctgtccacgatccagaatgctgacaagatcgcagtgtttcagaacggccaggtggtggag
ctagggacacaccaacagcttctctccaaacacggagtataccatgcacttgttaatatc
cagatgcaacaaatgaatagccatgaaaactaa
DBGET
integrated database retrieval system
