Polyodon spathula (Mississippi paddlefish): 121315004
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Entry
121315004 CDS
T07273
Symbol
mindy3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121315004 (mindy3)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121315004 (mindy3)
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121315004 (mindy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
121315004
NCBI-ProteinID:
XP_041104767
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All DBs
Position
4:complement(84747745..84792315)
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AA seq
467 aa
AA seq
DB search
MSALVNVGLKLKTRERVYGKMSELNKEVVDLVWGRRTGNGVSDTVFCRWTQGFVFSETEP
TALEQFHGGPCAVIAAVQAFLLKNILFNCENSNWRDCSEEKRKAVLCNTLSEILETACFN
KSKSYSLVTWSKEKVSEDNASISDSHPESSHHTKDEEPSALAAEELGFERFHTIIHKRTL
KTVGEMKEAILDLYDTWRNKFGVLLFLYSVILTKGIGNVKNEIEDSAEPLIDPVYGHGSQ
SLTNLLLTGYAVSNVWDGDRECSGMKLQGIHNQATVGFLTLMESLRYCKVGSFLKSPKLP
IWILGSETHLTVFFAKEMLLVAPESPSEQARRVFQTFDPEDNGFIPDTLLEDVMKALDLV
SETEYVNLMKSKLDPEGLGIILLGTFLQEFFPDQNSVIPDSFPVYHYNGLKQSNHNEKVM
YVEGTALVLGFEDPMVRTDDTPIKRCLQTKWPYIELLWTTDRSPSLN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctggtaaacgtcggattgaaactaaaaacaagagaaagagtctatgggaaa
atgtcagagctaaataaagaagtggttgatctggtttggggaagacgaactggcaacggt
gtgtccgataccgtcttctgcaggtggacccaaggatttgtcttcagtgaaacagagcca
actgccctagaacagtttcacggtggtccttgtgcagtgattgcagcagtccaggctttt
cttttgaagaatatcttgtttaattgtgaaaactctaattggagagattgttcagaagag
aaacggaaagctgttctttgcaatactttaagtgaaattttagaaaccgcttgtttcaac
aaatcaaaatcctactctttagtaacctggtcaaaagagaaagtgtcagaggacaatgcc
agcatttctgacagtcatccggaatccagccatcatacaaaggatgaagaaccctctgcg
ttggctgctgaggagcttggctttgagcgatttcatacaataattcacaaaagaacattg
aaaactgttggtgagatgaaggaagcaattttggatctttatgatacatggaggaacaaa
ttcggagtgctgctttttttgtattcagtcatattgacaaagggtattggaaatgtaaag
aatgaaattgaagattcagctgaacccctcatagaccctgtatatggtcatggaagccag
agtttaaccaacctgttgttgacgggctatgcagtttccaatgtttgggatggagacagg
gaatgttctgggatgaaactgcaaggtatacacaatcaagcaactgtaggctttcttact
ttaatggagtccctacgatattgtaaggttggatcgtttctaaagtctccaaagctccct
atttggatacttggcagtgaaactcacctcactgtgttttttgccaaggaaatgctcctg
gttgctcctgaatctccatcagaacaagcaaggagagttttccaaacctttgacccagaa
gataatggatttatacctgatacattgctggaggatgtaatgaaagcactggaccttgtg
tcagagactgagtatgtaaacctcatgaagagtaaattagaccctgaaggattaggaata
atattactaggaacttttctgcaagagttctttcctgaccagaactctgttattccagac
tcattccctgtgtaccactacaatgggctgaagcagtctaaccacaacgaaaaggttatg
tatgtagagggaaccgctttagttctgggctttgaggacccaatggtgcgcactgatgat
actccaatcaaacgctgtctgcaaactaagtggccatacattgaacttctgtggaccacc
gacagatctccctcattaaattaa
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