Polyodon spathula (Mississippi paddlefish): 121315013
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Entry
121315013 CDS
T07273
Name
(RefSeq) frizzled-1-like
KO
K02432
frizzled 1/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
pspa04310
Wnt signaling pathway
pspa04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121315013
04150 mTOR signaling pathway
121315013
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121315013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121315013
G protein-coupled receptors [BR:
pspa04030
]
Frizzled / Smoothened family
121315013
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
121315013
NCBI-ProteinID:
XP_041104780
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All DBs
Position
4:85506390..85508358
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AA seq
555 aa
AA seq
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MAWHSCFHKLSRMLLPTLSLLILGLCGARGQYGDRGLSVPEHGFCQPISIPLCTDIAYNQ
TIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPDLKFFLCSMYAPVCTVLEQALPPCRSLC
ERARQGCEALMNKFGFQWPDSLACESFPVHGAGELCVGQNKSDKGSPTHKPNESVPDEII
TDKYPRDHFTCPKFLKVPTYLNYHFMGEKDCGAPCEPLISSGMMYFSQEELKFSRIWIGI
WSVLCCASTLFTVLTYLVDMKRFSYPERPIIFLSGCYTMVAIAYIAGFLLEDKVVCNDKF
NDDAYRTVAQGTKKEGCTILFMMLYFFSMASSIWWVILALTWFLAAGMKWGHEAIEANSQ
YFHLAAWAVPAIKTITILAVGQVDGDVLSGVCFVGINNVDALRGFVLAPLFVYLFIGTSF
LLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGIFSVLYTVPATIVIACYFYEQAFREQW
EKSWLSQTCKAYAIHCPPNNYPHMTPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRK
FYTRLVNSNQGETTV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcacagttgctttcataaacttagtaggatgctgttgccgacattatcttta
ctgattttagggttatgtggtgcgcgtggacagtacggggaccgcggactttctgtccca
gagcatggattttgccagcctatttctataccactttgcaccgatatcgcttacaaccag
accatcatgcccaatttactggggcatacgaaccaggaagatgccgggctagaagttcac
cagttttacccgctcgtaaaagtgcagtgttccccagatctgaagtttttcctgtgctct
atgtatgcaccggtatgtaccgtgctagagcaagctctacccccgtgccgatccctttgc
gagagagcgagacagggctgcgaggcactgatgaacaaattcggcttccagtggcctgat
agcttggcatgtgaatcttttcccgttcacggagctggcgagttgtgcgtgggacagaac
aagtctgataaaggaagccccacgcacaaacctaacgaatccgtaccagatgaaatcatt
actgacaagtaccccagggaccacttcacatgccccaagtttttgaaggtccccacgtat
ttgaactaccactttatgggggagaaagactgcggtgctccctgtgagcctttgatatcc
agcggaatgatgtacttcagtcaggaagagctaaagttttccaggatttggattgggatt
tggtctgttttgtgttgtgcttccacattgtttactgtcctcacctacttggttgacatg
aagaggttcagttaccccgagcgccccatcattttcctgtctggctgttacaccatggtg
gctatagcctacattgctggatttctgctcgaggataaagtggtttgtaatgacaagttt
aacgatgacgcttacagaacagtggcccagggcaccaagaaagaaggctgtaccatcttg
tttatgatgctgtactttttcagcatggcaagctctatctggtgggtcatcctggccttg
acttggttcttggcagcagggatgaagtgggggcatgaagctattgaagccaactcgcag
tattttcacttagcggcatgggctgtgccagctatcaagaccatcactattttggcagtg
gggcaggtggatggtgacgtcctcagcggggtgtgctttgtggggatcaataatgtggat
gccctgcgaggatttgtcctggcacccctctttgtctacctttttattggcacctcgttt
ctgctggcaggctttgtttcactgtttcggatccgaacaataatgaaacacgatggcacc
aagactgagaagttggagaagctcatggttaggataggcatttttagcgtcctctacact
gtccctgctactatcgtcattgcttgctatttttatgaacaggcttttcgggaacagtgg
gagaaaagctggcttagccaaacctgcaaggcctatgcaatccattgccctcccaacaat
tatccacacatgactccagacttcacagtcttcatgattaaatatctcatgaccttgatt
gtggggatcacctcagggttttggatatggtcgggtaaaacactaaattcttggaggaaa
ttttacacaagactagtgaatagtaaccaaggggaaacaacagtgtaa
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