Polyodon spathula (Mississippi paddlefish): 121315033
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Entry
121315033 CDS
T07273
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121315033 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Het-C
Motif
Other DBs
NCBI-GeneID:
121315033
NCBI-ProteinID:
XP_041104834
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Position
4:complement(86797137..86813862)
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AA seq
487 aa
AA seq
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MNRNILAFPAKIMEHFSFLVVFSVALLVRCSDVKHENVDWRIGQNFSSILLSRRRAVEQM
DVYTILSKVHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGDARNDPITFNTNLMGYP
DRPGWLRYIQRTPYSDGVLYGSPTADLVGKPIIIEITAYNRRTFETARHNLVINVMFSEE
FPLKYQAEFFIKNMNVEEMLASQVLGDFLGAVKNVWQPDRLNAINITSALDRGGRVPLPI
NDLKEGVYVTVGADVPFSSCLKEVETPQNQQLCSQEMEPVISCDKKFRAMFYIDWCKISL
VDITKLVSVGKERPDPGNGVLPDVGEYSPPSESLKSRDYFSDFLITLAVPSAFALVLFII
LGYIMCCRREGVQKRNMQTPDIQLVHHSSIQKSTKELRNMSKNREIAWPLSTLPVFHPVS
GEIVPPLHPDSYKTTSMPLMQTQTNLQHQTQMSQQQTAGRNYCMSTFQRREVNGIPEERK
LTEALNL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaatatacttgcatttccagcaaagataatggaacatttcagctttctcgtc
gttttttctgttgctcttttagtcagatgttccgatgtcaaacatgaaaacgttgattgg
aggattgggcaaaacttcagtagtatattattaagcaggcgcagggcagtcgagcagatg
gatgtttacactatcctctccaaggtgcatgctgaccggaatgtctatccttctgctggg
gtcctctttgttcatgttttggaaagagagtattttaagggggaattccctccttatcct
aaacccggcgatgcaaggaatgaccctatcacatttaacacaaatttaatgggctacccg
gacagacctggctggcttcgctatatccagagaacaccgtatagtgatggagtgctttat
ggatctccaacagctgatcttgttggcaaaccaattatcattgagattactgcctacaac
cgacgaacatttgagactgcaagacacaaccttgtcattaacgtcatgttttcagaggaa
tttccattaaagtaccaagcagaattttttataaagaacatgaatgttgaagagatgttg
gcaagtcaggtgctgggagatttccttggagctgtgaaaaacgtatggcagccagatcgg
ctaaatgccattaatatcacttcagcattggacagaggaggcagagtccctctccctata
aatgacctaaaggaaggggtgtatgtgacggttggtgctgatgttccattctcttcctgt
ctgaaggaagtagaaactccacagaaccagcagctttgcagtcaggagatggaacctgtc
attagttgtgataagaagtttagggcaatgttttacattgactggtgcaaaatatctctg
gtagatattacaaaattagtctctgttggtaaggaaaggcctgacccaggaaatggagtg
ttgcccgatgttggagaatacagtccgccttctgagtcactgaaaagtagggactatttc
tcagacttcctgatcacactggcagtgccttctgcttttgccttggtacttttcatcatc
cttgggtacatcatgtgctgccgacgggaaggggtgcaaaaaagaaacatgcaaacacca
gacatccagttggttcatcacagttctatccagaagtctacgaaggagctacgaaacatg
tccaagaaccgcgagatagcatggcctctttcaacattgcctgtgtttcacccagtcagc
ggtgaaattgtgccacccttacacccagacagctataagactaccagtatgccactaatg
cagacacaaactaatctgcagcatcagacacagatgtcacaacaacagactgcaggacgg
aattattgtatgtcaacattccagcgacgcgaggtaaatggtattcctgaagaaagaaag
ctgacagaagcactaaatttgtaa
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