Polyodon spathula (Mississippi paddlefish): 121315071
Help
Entry
121315071 CDS
T07273
Symbol
snx13
Name
(RefSeq) sorting nexin-13
KO
K17925
sorting nexin-13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121315071 (snx13)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121315071 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
121315071
NCBI-ProteinID:
XP_041104900
LinkDB
All DBs
Position
4:complement(89489153..89533359)
Genome browser
AA seq
960 aa
AA seq
DB search
MLAETSLSIWGWGGLGVVLFLVTFGPFAIFYLAFYILCFTGGCFTVTLLFGKTNSEKHLE
QCEHSFLPATQTGILKTLEEVKQESRQIKIDRRLTGASIIDEPLQQVIQFALRDYIQYWY
YTLSDDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERMT
EKDDQKHLKDEPEELLESFFEAEVEMERKICRDLVCTSPRDEEGFLRDLCEVLLYLLLPP
GDFHNKNMRYFVREILARGILLPLINQLSDPDYINQYVIWMIHDSSCNYEAFMNILKLSD
KVGELEAVKDKAMEELQFLRSLDTAGDDINVIKNQINSLLFVKKICDTRIQRLQSGKEVD
TLKLVANFGKLCVIPLEHILVHNIALQFFMDYMQQKGGQADLFFWLTVEGYRVTAQQQLE
VLQNWQKDGKKQTNQTKDLLKAAALGVYEQYLSEKASPQVQADESLVERLAEKLKNEDPT
PEIFDDIQRKVYDMMLRDERFYPSFRQHPLYVRMLAELDMLKEPSFRGSDDGDGESFNGS
PTGSINLSLDDLSNASSDESMQLHAFISDTGVCNDHGKTYALYAITVFRKNADGSEDTWK
TYRRYSDFHDFHMRLTEQFENLTSILKLPGKKTFNNMDKDFLEKRKKDLNAYIQLLLNPE
MIKACAPLAFYLCDFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNAVKAIPDSLVEG
MTKVSDNMGKMSEKLGQDLKQSIFKVPPLIQKSDIDPEHCRVSAQLDDNVDDNIPLRVML
LLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDLMTSPEQVADHVKHF
RDAFWPNGILAETPPRRDKAIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFKM
FQHNQLNRRLVYVFIEGFLETMFPQYKFPELFIKLHSRSERMKKYSQKLKTSQVPSLQKR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagaccagtctttccatatggggatggggaggccttggtgttgtgcttttt
cttgtaacgtttggaccgtttgcaatattttatttagcattttatatcctgtgcttcact
ggtggctgttttacagttactcttttatttggaaaaacaaactctgaaaaacatcttgaa
cagtgtgaacactcctttcttcccgcaacgcaaactggcatactcaagaccttggaagaa
gtaaaacaagaaagtcggcaaataaaaatagacagaagactgactggggccagcatcatt
gatgaacctttacagcaggtaattcagtttgccctaagagactacatccagtactggtat
tacacactaagtgatgatgaatcttttcttcttgaaatccgacaaacagtacaaaatgcc
cttgtccagttttctaccaggtcaaaagaagtagactggcaaccgtatttcacaacacga
ttagtagatgactttgcaactcaccttcgggtttttagaaaagctcaagaaaggatgaca
gaaaaggatgatcagaaacatctcaaggatgaaccagaggagcttttagaatccttcttt
gaagctgaagtagaaatggagagaaaaatctgtcgtgatcttgtctgcacttcacccaga
gatgaagaaggatttttacgggatctgtgcgaagttttactgtacttgttactacctcct
ggagacttccataacaagaacatgagatactttgtgagggaaatccttgcaaggggaatt
ctccttccactgattaaccagctcagtgatccagactatattaatcagtatgttatatgg
atgattcatgattctagctgtaactatgaagcgtttatgaacattctcaaactaagtgac
aaagtgggagagctggaagctgtgaaagataaagccatggaagagctgcagtttcttcgc
tctttagacactgcaggagatgatatcaatgtgattaagaatcaaataaacagcttacta
tttgtgaagaaaatctgtgacacaaggatacagaggttgcagtcaggaaaggaagtggat
accttgaaacttgtagccaactttggaaaactgtgcgtaattcctctggaacacatattg
gtccacaacattgcactacagtttttcatggattacatgcagcagaagggagggcaggca
gaccttttcttctggcttacagtggaagggtatcgagtcacagcacagcagcagctggaa
gttttacagaactggcagaaggatgggaaaaagcagaccaaccagaccaaagacttgtta
aaagctgctgcactcggggtttatgaacagtatctgtcagaaaaggcatcccctcaagtt
caggctgacgaatccttagttgaaagactggcagaaaagctcaaaaatgaagacccaaca
cctgaaatatttgatgatatccaaagaaaggtgtatgacatgatgctgcgggatgagcgg
ttctacccgtctttcagacagcatcctctttatgtgcggatgttggctgagcttgacatg
ttgaaagaaccaagtttcagagggtcggatgatggagatggagaatcatttaatggttct
ccaacaggaagcattaatttgtccctagatgacctctcgaatgctagttctgatgaatca
atgcagctgcatgcattcatttctgatactggagtgtgcaatgaccatgggaagacgtat
gcattgtatgcaatcactgtgtttcggaagaatgcagacggcagcgaggacacctggaaa
acctatcgtcgttacagcgacttccatgactttcatatgcgtctcacggagcagtttgaa
aaccttacaagtattttaaagctccctgggaagaagaccttcaacaacatggataaggat
ttcttagaaaagagaaaaaaagacctgaatgcctacatacagttattgctgaatcctgaa
atgattaaagcttgtgcccccctggctttctatctgtgtgattttctggaaaacaaagcc
tataataaagggaaaggggactttgcacgtaagatggatacctttgtaaacccactacgc
aattccatgagaaatgtctccaatgctgtcaaggccattcctgacagtctggtagaggga
atgacgaaagtgtcggacaacatgggaaaaatgtcagaaaaactggggcaggatttaaaa
cagtcaatatttaaggttccccctttgattcagaagtctgatatagaccctgaacactgc
cgtgtctccgctcagctggatgataatgtggatgacaatattccactcagggtaatgcta
cttttaatggatgaagtctttgatctgaaagaaagaaaccagtggttgaggcggaatatt
aaaaacttactgcagcagctcattcgagcaacatatggagacacaataaacagaaaaatt
gtagatcatgtggacctcatgacctcccctgaacaagttgcagaccatgtgaaacatttc
agagatgccttttggcccaatggtattttagcggaaacgccaccccgcagggataaagca
atccgaatgagaacaagagtggctgccaagactaacctgcttggaataatgccagatgag
ctgaagcacattattggtgctgacacaacacggaagggaatattacgggtctttaagatg
ttccagcacaaccagttaaaccggaggcttgtttatgtttttatagagggattcctcgaa
accatgtttcctcaatataaattccctgagctctttatcaaactgcattcaagatctgaa
cggatgaaaaaatattcacagaaattaaagacttcccaggttccctctttacaaaagagg
tga
DBGET
integrated database retrieval system
