Polyodon spathula (Mississippi paddlefish): 121315076
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Entry
121315076 CDS
T07273
Symbol
abcb5
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121315076 (abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121315076 (abcb5)
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121315076 (abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_5
AAA_21
AAA_28
Rad17
AAA_29
AAA_30
G-alpha
Viral_helicase1
nSTAND1
ATP-synt_ab
MeaB
Zeta_toxin
DUF2207_C
AAA_15
Motif
Other DBs
NCBI-GeneID:
121315076
NCBI-ProteinID:
XP_041104910
LinkDB
All DBs
Position
4:90096011..90138646
Genome browser
AA seq
1305 aa
AA seq
DB search
MKEDLETPKATDNDIIEGGYENPAFHEDEKSEEDSKSKKKDKKKKTSEKKGESTKMVGVF
ELFRFATGLEIIMMIVGLICAAGHGVALPIMLIVFGQMTDSFVNSGLKQNTSATQMNTSS
KCAAASGVDIESEMTKYAYYYIGIGAAVLVLATMQVAMFLLSATRQTKRIREKLFHAILH
QHMGWFDTHQIGTLNQRLTDDINTINEGLGDRICIFVQFFCTFVAGFIIGFIYGWKLTLV
ILSVSPLLAASAAVLSKILASLTSKELSAYAKAGAVAEEILVSIRTVVAFNGQKKAVEKY
ETNLQAAKELGVKKVITTNISLGLSQFIIFGSYALAFWYGTKLVVDDPQNYTIGNMLTVF
FSVLIGAFALGQGAPNLENVANARGAAYEVYKIIDLPRPIDSSSKQGYRPDHLKGDIEFK
NIHFSYPSRPDANVLQGLSLKIESGKTIALVGASGCGKSTTIQLLQRFYDPAAGEITLDG
QDIRSLDVKWLRENIGVVSQEPVLFATTIAENIRYGRDDASDADIEQAAKEANAYDYISK
LPDRFNTMVGERGAQLSGGQKQRIAIARAIVKNPKILLLDEATSALDTQSESIVQEALDK
ARAGRTTIIIAHRLSTIKTADVIAGFDNGTVVEQGTHNELMLKKGVYYSLVMQQSTSKNT
EESEETETDEEAELLETEQSEDTSLKRMGTLRRRSTRRKIKSRNSIKRANEAKRNEEDDV
LPDVPFTKILALNKPEWPYLLAGLIAAIIGGGVYPAFSIVFAKIIGVFAEPDPDIKREKT
IMFSLIFLLLGGIAFLTNFFQGFMLGTSGEILTMRLRYQSFKAMLRQEIGWFDDNKNATG
VLTTRLATDASLVKGAAGTRLGLFANAVCTLGVSIIVAFVYGWQLCLLILACLPFLAGAN
FIRMKSIAGHASKDQSALELSGKISTETVENIRTVVALTREDVFLGMYKESLEGPYRVSL
SKAPLYGLTYSFAQAISFFVNAAIFRFGAWLIAHCLTEYENVFVVFSSIVFAAMNIGQTS
SFAPDYAKAKMSAQRIFMLLVDKPTIDIYSEEGEMPSDFEGNIEFRNIRFAYPTRQTAQV
LQGLNVTAGKGQTLALVGGSGCGKSTLVQLLERFYDPATGQVLADGKDTKSLNLAWLRSQ
MGLVSQEPILFDCSIAENIQYGDNSRVVTQEEIEAAAKSANIHDFIQNLPEKYSTNVGDK
GAQLSGGQKQRIAIARALIRKPKVLLLDEATSALDTESEKIVQQALDEARQGRTCIVIAH
RLSTIRNADKIAVIQDGQIVEQGTHSQLIAKEGAYYALVNAQVSH
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacttggaaacacccaaagcaactgataatgatatcatcgaaggtggatac
gagaaccctgctttccatgaggatgaaaaatctgaggaagattccaagtcaaagaaaaag
gataagaaaaagaagacatctgaaaagaagggagagtccactaaaatggttggagttttt
gagctgttccgctttgctactggcttggaaataataatgatgatagtgggtttaatatgt
gcagcaggacatggagttgcactgccaattatgttgattgtgtttggtcagatgactgac
agctttgtcaacagtggcttaaaacaaaacacatctgctacacagatgaataccagttcc
aaatgtgccgctgcatcgggggttgacattgaatctgaaatgacaaaatatgcttactac
tatattggtattggggcggctgtactggtacttgcaacaatgcaggtggcaatgttcctt
ttgagtgctacaagacagacaaaaaggatacgtgaaaaattatttcatgcaatacttcat
cagcacatgggctggtttgatactcatcagattggaacactaaaccaaagattaacagat
gatattaacacaatcaatgaaggacttggagatcgaatctgtatatttgtgcagttcttt
tgcacatttgttgcaggttttataattggatttatatacggatggaaacttacattggta
attttgtcggtcagccccctgttagcagcatcagcagctgtcttgtcaaagattctggcc
tccttaactagtaaagaactgtctgcgtatgcaaaggctggagcagttgcagaagagatt
ctggtgtctataaggactgtggttgcttttaatggacagaaaaaagctgtggaaaaatat
gaaaccaacctacaagcagctaaagagcttggtgtgaaaaaggttatcactacaaatata
tctctgggactcagccagtttattatatttgggtcctatgctctggctttttggtatgga
acaaagctagttgttgatgacccacaaaactacacaattggaaacatgctgactgttttt
ttctccgtgctgatcggtgcattcgcattgggccaaggagcaccaaatttggaaaatgtt
gcaaatgctcgtggagctgcctatgaagtctacaaaattattgatttgcctcgaccaatt
gacagcagttccaagcaagggtacagacctgatcacttgaaaggtgacattgaattcaag
aatatacacttcagttatccttctcggcctgatgcaaacgttctccaaggactgagtcta
aaaattgaaagtggaaagacaattgcactggttggagccagtggttgtggtaaaagcacg
acaattcagcttcttcagcggttctatgatccagccgcaggagagattactttggatggg
caagacattcgctctctagatgtcaagtggctgagagaaaatatcggggtggttagccag
gagcctgtcctgtttgccaccacaattgctgaaaacattcgctatggcagagatgatgct
agcgatgcagacatagagcaagcagcaaaagaggccaacgcttatgactatatatcaaaa
cttcctgaccgctttaacacaatggttggtgaaagaggagctcagttgagtggaggacag
aagcagagaattgctattgctcgtgccattgttaagaatcccaaaatccttctcctggat
gaagccacttcagctctggatactcaaagcgaatccattgtgcaggaggccctagataag
gcaagagctggccgtactactattataattgcccatcgcttatcaacgatcaagacagct
gatgttattgccggttttgataatggaactgtggttgaacaaggaacccacaatgagctc
atgttaaagaaaggagtgtactactctcttgtaatgcagcagagtaccagtaaaaataca
gaggaaagtgaggaaacagaaactgacgaagaagcagaattgttggaaaccgaacagtct
gaagacaccagcttgaaaagaatgggaaccctcaggagaagatcaaccagaagaaaaatt
aaatcaagaaactccataaagagagcaaatgaagccaaaagaaatgaggaagatgatgtt
cttccagatgttccttttactaaaattctggcactgaataaaccagaatggccatacttg
ttagctggactgattgctgctattattggaggaggtgtttatcccgctttttcaattgta
ttcgcaaaaattattggggtttttgcagagcctgaccctgatataaaaagggaaaaaact
ataatgttttcccttatatttcttcttcttggaggaattgcctttttaaccaactttttc
cagggattcatgcttggaacatctggtgaaattctaacaatgaggctacgttaccaatct
tttaaagctatgttgagacaggagattggctggtttgatgataataaaaatgccacaggt
gtattaacaacaagacttgcaacggatgcttcacttgttaaaggagctgctggaacaaga
ctgggtttgtttgccaatgcagtttgcactctaggagtgtctataattgttgcctttgtt
tatggctggcaattatgtttgctcatcctagcttgtctcccattccttgctggagcaaat
ttcattcgaatgaaatcgatagcaggacatgcctccaaagaccagagtgcactggaatta
tctggaaagatttccacagaaactgttgaaaatattagaacagttgttgctttaacacga
gaggatgttttcttaggaatgtataaggaaagtttggaagggccttacagagtatcgctg
tcaaaagcacccctttatggactgacctattcttttgctcaggcaatttccttctttgtg
aatgcagctatttttaggtttggagcatggttgattgcacactgtctcacagaatatgaa
aatgtatttgtggtattttcttcaatagtatttgctgcaatgaatattggacagacctca
tcttttgcaccagactatgccaaagcaaaaatgtctgcccaaagaatattcatgctgctt
gtcgataagccaacaattgatatctacagtgaagaaggagaaatgccaagtgactttgaa
ggcaatattgaattccgcaatatacgttttgcataccctaccagacagactgctcaggtc
ctacaaggactcaatgtgacggctggcaaaggacagactcttgcgttggtgggaggaagt
gggtgtggaaagagcactttggtgcagttgctggagagattctatgacccagctactgga
caagtgcttgcagatgggaaagatacaaagagcttgaaccttgcctggctgcggtctcaa
atgggattggtgtctcaggaacccattctctttgactgcagtattgctgaaaacattcag
tatggagacaacagtagagtggtgacccaagaagaaattgaagcagcagctaaaagtgca
aacatccacgacttcattcagaatttacctgagaaatacagcacaaatgttggggataaa
ggggcacagctttccggaggacagaaacagagaattgccattgcgcgtgctctgatccgt
aaaccgaaggtgctccttttggatgaggctacttcagccctcgatacagaaagtgaaaag
attgtacagcaagccttggatgaagcccgacaaggccgcacttgcattgtcattgcccat
cgattatctaccattagaaatgcagataaaattgctgtcattcaggatggacaaattgta
gagcaaggaactcacagtcagctgattgcaaaagaaggtgcttattatgcccttgttaat
gctcaggtttctcattaa
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