Polyodon spathula (Mississippi paddlefish): 121315079
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Entry
121315079 CDS
T07273
Name
(RefSeq) transcription factor Sp4-like
KO
K09194
transcription factor Sp4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315079
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121315079
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-GeneID:
121315079
NCBI-ProteinID:
XP_041104913
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Position
4:90288600..90305202
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AA seq
761 aa
AA seq
DB search
MSDQKKETMATEGGKSSGGDYGNKGKTSVLQDAQPSPLALLAATCSKIGGAPGENQAGGQ
QHIIIDPSQGLVQLQNQPQQLELVTTQLAGNAWQIVAAAPAVSKENSAQQGVAVVTSAPG
SNNDSIATSKAKTVTSNNVTVGQQQFQVIQVQNMQNSTGAVQYQVIPQIQTLDGQQIQFS
SVNPTALNLQHDQIQFIPAGNNQAIITTPNRATSANIVPQNVANQAIPFQIRPGMSFPLQ
LQTIAGAQTQMVTTVPINIGGVTLALPVINNVAAGGGSLQLVQPADGGVSNGNQLATTPI
SSAVSSMPGSPSCTTTAAATLSGSDTLVVNSAEAGQYTNASSTPESASEQESHNVTGNEP
DGSSPVQANGLQTVQDQSNQIQQVQIVGQPMLQQIQIHQPQQPLIQGLSQQAIQLQPGQT
VQPLQNVQLQAVQSPAQVLIRAPTLTPSGQISWQTVQVQNLQNLSNVHLQNAGMPQQLTF
TPVTSNATGSTFAQITPLTVGGTPITLNAAQLTSLPNIQTVNIANLGAAGVQVQGVPVTI
TGVTGQQQNQDGVKVQSSPVTVAVGNIANAVSPDQITQVQIQQTQQVSDQEGQPGKRLRR
VACSCPNCRDVEGRNNSEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFVCNWI
FCGKRFTRSDELQRHRRTHTGEKRFECLECSKRFMRSDHLSKHIKTHQNKKGGAALAIVT
TEDMEDTVNDVLGSPRIVTITSLSQDSNPASPNASSNMDEF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaaaagaaagaaacgatggcgacagaaggagggaaatcatctggtggggat
tatggcaataaaggcaaaacttctgtattgcaggacgctcaaccctctcctctggcactg
ctagccgctacttgcagcaaaataggaggggctccaggtgaaaaccaggcagggggacag
caacacattatcatcgatcccagtcaagggcttgttcagttgcaaaaccaaccgcagcag
ctggaactggtcactacacagcttgctgggaacgcctggcagatcgtcgcagcagctccg
gcggtatcaaaagagaacagtgcacagcaaggggttgctgtggtcaccagtgcacccggc
agcaacaatgacagcatcgccaccagcaaagctaagaccgtcacctccaacaatgttaca
gtggggcagcagcaattccaagtcattcaggtgcagaatatgcagaattcgaccggcgcc
gtccagtatcaggtgattccgcagattcagactttggatggccagcagatccagttcagc
tccgtaaaccccacagctctgaacttgcagcacgaccaaattcagttcatacctgctgga
aataaccaggccatcatcactacgccaaacagggctacctctgcaaatattgttccccag
aatgtggcgaatcaagcgataccctttcaaatcaggccggggatgtctttcccgttgcag
ttgcagacaattgctggcgctcagactcaaatggtgaccaccgtacccattaacataggc
ggagttactttggcattgcctgtgataaacaatgtggccgcgggaggagggtctctccag
cttgttcagcctgctgatggtggggtctctaacggaaatcagctggcaaccacgcctatc
tccagtgctgtcagtagcatgccgggatctccctcctgcacaaccactgcagctgcgacc
ctgtccggcagtgacactcttgtggtaaactctgcagaagctggacagtacaccaacgcc
tcctccacaccagaaagtgcatctgaacaagaatctcacaatgtcacgggtaatgagcct
gatggttcgagcccggttcaggctaacggattgcaaacggttcaggaccagtcgaatcag
attcagcaggtgcagattgtgggacagcccatgctgcagcaaatacagatccaccagccc
cagcaaccgctgatacagggtctttcacaacaggcaattcagctccagccggggcagact
gttcagcctttgcagaacgttcagctccaggcagtgcagagtccagcccaggtgctcatt
cgggccccgactttgacaccgtctgggcagatcagctggcagaccgtgcaggtgcagaac
cttcagaacctttccaatgtgcacttgcagaacgcaggaatgccccaacagctcaccttt
accccggtgacctcaaacgcgacagggagcacgtttgcccaaatcacgcctcttactgtt
ggtggtactcccattactttaaatgctgcccagctcacatcgttgcccaacatacagaca
gttaacattgcaaatcttggagctgccggggttcaagtacagggagttcccgtcaccatc
acaggtgtaacaggccagcagcagaaccaggatggagtgaaggttcagtcctctccagta
acagtagccgtggggaacattgcaaatgctgtcagccccgaccagatcacacaagtgcaa
attcagcagacccagcaagtctctgaccaggaggggcagccaggaaagaggctcaggagg
gtcgcctgctcatgtcccaactgccgggatgtagaaggaagaaacaacagcgagcctggg
aagaagaagcagcacatctgccacatcgagggctgcgggaaagtgtatgggaagacgtct
cacctgcgagcacacttgcgctggcacacgggagagaggccctttgtgtgtaactggatc
ttctgtgggaagcgcttcacccggagtgacgagctgcagagacaccggcgcacccacaca
ggtgagaaaagatttgaatgcctagaatgttcaaagaggttcatgagaagcgaccacctt
tccaagcacatcaaaactcaccagaacaagaagggtggtgcagccttggctattgtcacc
actgaggacatggaggacactgtgaacgatgtcctgggctccccacggattgtcaccata
acctcgctgtcccaggattcaaacccagcttccccaaacgcatcaagcaacatggatgag
ttttaa
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