Polyodon spathula (Mississippi paddlefish): 121315089
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Entry
121315089 CDS
T07273
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121315089
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121315089
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121315089
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121315089
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121315089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
121315089
NCBI-ProteinID:
XP_041104928
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All DBs
Position
4:complement(90698372..90707074)
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AA seq
314 aa
AA seq
DB search
MSDVEDTHFGGRGSRSPSKSDCGSPVRVKPESRSGSGSPSRASKRSESRSKSRSKSRSRS
RKHSHRRYSRSRSRSHSHRKKSRSRSYSPECRRKKSRSTSPMSSRRRHAGSRTRFSNDIK
KESSNHSDARLFHQANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGR
SRGFSFVYFERIDDAKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSNGS
SSSGGGGGSSGGSGGRRRDSYNDRGGYDRGGYDRGGYDRYDEYDNRYSRRRSPSPYYSRC
RSRSRSRSYSPRRY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcgaggatacgcatttcggtggaagaggatcccgttctccatcgaaatct
gattgtggcagcccagtgcgtgtgaagcctgagagtcggtctgggtctggtagtccttca
agagcttcaaaacgatcagagtccaggtcaaagtcaaggtccaaatcaagatcgcgctct
aggaagcactctcacaggaggtattcacgctcaaggtcccgctcacactcgcacaggaag
aaatccagaagccgctcatactcgcctgaatgccgtcgcaagaagagccggagcacctct
ccaatgtcaagtcggcgcagacatgcaggcagcaggacaagattcagcaatgacatcaaa
aaagagtccagcaatcatagtgatgccaggcttttccaccaggcaaatcctgacccaaac
acctgtctcggagtgtttgggttaagcctgtacacaacggagagagacctgcgtgaagtg
ttttcccggtacggaccgctggctggcgtgaatgttgtctatgatcagagaacaggacgg
tcaagaggattttcatttgtgtacttcgaaagaattgatgacgcaaaagaggcaatggaa
cgtgccaatggaatggagcttgacgggaggcggatacgtgtagattactccatcaccaaa
cgggcccacactcctactcctggcatttacatgggaaggccaactcacagcaacggcagt
agtagcagcggcggtggtggtggcagcagtggcggtagtggaggacgtcgccgtgattct
tataacgatcgaggaggctacgatcgaggaggctacgatcgaggaggctacgaccgatat
gacgagtatgataacagatacagtcggaggcgatctccgtctccttattacagtagatgc
agatcccgctctagatctcgttcctacagtcctcgacggtattaa
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