Polyodon spathula (Mississippi paddlefish): 121315115
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Entry
121315115 CDS
T07273
Symbol
tax1bp1b
Name
(RefSeq) tax1-binding protein 1 homolog B
KO
K21347
Tax1-binding protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121315115 (tax1bp1b)
04137 Mitophagy - animal
121315115 (tax1bp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315115 (tax1bp1b)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121315115 (tax1bp1b)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121315115 (tax1bp1b)
Xenophagy
Cargo receptors
121315115 (tax1bp1b)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121315115 (tax1bp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKICH
CALCOCO1
Zn-C2H2_12
DUF1664
APG6_N
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
121315115
NCBI-ProteinID:
XP_041104968
LinkDB
All DBs
Position
4:91579134..91617759
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AA seq
813 aa
AA seq
DB search
MSLFEDLSATGNTTEMSNFAHVIFQNVAKSYLPHAALECHYTLTPYIRPHPKDWVGIFKV
GWSTARDYYTFLWSPLPEKYVEGTSVNCVVVFQGYYVPNDVAEFYQFCYVTYKGEIRGAS
TPFQFRATSPTDDLMTMEDESNSDILVVTTKAGMLEYKIEEALKEKEELMKVISLLQKEK
DQLEEQAEKLGKAADQQKETCAQAKKEYQDILNESQTLKDENEEIKKKYENATSRILELE
NNLIGVSQKAIEKETELDSIRGRLKKLSLEKEQLESQLKNEKDEKELYKNHLKNTELENT
KLTAEVQTLKSVAVNKENLLTQLREESGMLKMCMAEKEKAQKEMLTASSTKAESGFLREQ
LRKSEDQLQATRQEVSMLAAELRDVFNVRDRTMSDLYTAHLEIDSLKKSLGDAEAECKAK
DGMLQNMKAIAEKNEKEGPGKNSMVEQELHREVEDLKLRLQMAAEHYKEKYKECQKLQKQ
AVKPTEQAESKKTAVAFSFQATETAANSDTAGAVTIPPVCPASSDTVLDLLTQEKIQVMN
KEMSERNDKKWKQMLTEEKEKSSRYADELAKMELKLKEQLKINESLKLQLAAEKDRYKEL
QEKIESQLERITEEQSSQGAMQVGVTQPVLQQYTIPYSPENLPATLVAARPPELHYGNPY
STQHKRDGADGTFSPDQIHRPPIGAPCWDSNVVCIQPARNLNRPDGLEDSEELSNGERDA
ETVQSAASDPGHSLLQDRRAHFCFDSSIDVCKKCPLCEVIFPPNYDQSKFEEHVESHWKV
CPICNEQFPLDFDQCTFEKHVQTHFDGNVLNFD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatttgaagacctatcggcaaccggcaataccacggagatgtcaaactttgca
catgtgatctttcaaaatgtggcaaaaagctaccttccacatgctgctctggagtgtcac
tatactctgaccccgtacatcaggcctcatccgaaagactgggttggcatttttaaggtt
ggctggagcacagctcgggattactatacttttctgtggtcacctcttccagaaaagtat
gtagaaggaacatcagttaactgtgtggtggtatttcaaggttactatgttccaaacgat
gttgcagagttctatcagttctgttatgtcacatacaaaggtgaaattcgaggagccagt
acaccattccagttccgagctacttcccctacagatgacctgatgaccatggaagatgaa
agcaattctgatatactggttgtgaccaccaaggctggcatgcttgagtataaaattgaa
gaagctttaaaagaaaaagaagagctaatgaaggtgatatccttgctgcaaaaagaaaaa
gatcagcttgaagaacaagctgagaagctggggaaggcagcagatcagcaaaaggagacg
tgtgcacaggccaagaaggagtaccaggatattctcaatgaatcacaaacccttaaggat
gagaacgaagaaattaagaaaaagtatgagaacgccacttctcgaattctagagttggaa
aacaacctaattggggtgtcccagaaagccattgagaaggagactgaattagacagcatt
cgaggaagactgaagaaactaagtctggagaaagaacagttggaatctcaattaaaaaat
gagaaggatgagaaagagctgtataagaatcacctgaagaatacagagctggagaacaca
aagctaactgcagaggtacaaacattaaaatccgttgctgtaaacaaagaaaacctgctc
acacagctgagagaagagtcgggcatgctgaaaatgtgcatggcagaaaaggagaaggcg
caaaaagaaatgctgactgcgtcctccaccaaggctgagtctggatttttgagagaacag
cttcgaaagagcgaggatcagcttcaggccacaaggcaggaagtgtccatgttggcagca
gagctgagagatgttttcaatgttcgggataggaccatgtctgacctgtacactgcacac
ttggagatagattctttgaagaagagtcttggtgatgctgaagcagagtgtaaggctaaa
gatggaatgttgcaaaacatgaaagctatagctgaaaaaaatgaaaaggagggaccagga
aagaacagcatggtggaacaagagctgcatagagaagttgaagatttaaaacttcgactt
cagatggcagcagaacattataaagagaagtacaaggaatgtcagaaacttcagaagcaa
gcagtgaagcccactgaacaagcagagtcaaagaaaactgcagttgcatttagctttcaa
gcaacagaaactgcagcaaattcagatactgctggagcagtgaccatccccccagtctgc
ccagcatcatctgatactgtgcttgacctgctcactcaagaaaaaatacaagtaatgaat
aaagaaatgtctgaaagaaacgacaaaaaatggaaacagatgctgactgaggagaaagaa
aagagcagtaggtatgcagatgagttggccaaaatggagctgaagttgaaggaacagttg
aaaataaacgagagcttgaaactgcagttagctgcagagaaggatcgctataaggagcta
caggaaaaaatagaaagccaactggaaagaataactgaagagcagagttcccaaggtgca
atgcaggttggcgtgactcagccagtgctccagcagtacacgattccatattcaccagaa
aacctgccagccactctggtagcagcgagaccccctgaactgcactacggaaatccctat
tccacacagcacaagagagatggagcagatggtacattttctccagaccagatccacaga
cctcccataggagccccctgttgggacagtaacgtggtttgcattcagccagcacgcaac
ctaaacaggcctgatggacttgaagactcagaagagcttagcaatggtgagcgtgatgcc
gagactgtacagtcagcagccagtgacccagggcattccctgcttcaggatcgaagggct
cacttctgctttgattctagcattgatgtgtgtaagaagtgcccactgtgtgaggtcatc
tttcctcctaattatgaccagagcaagtttgaagagcatgttgaaagccactggaaagtg
tgccccatatgcaatgagcagtttccgctagactttgaccagtgcacttttgagaaacat
gtgcagacccactttgatggaaatgttttgaactttgattaa
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