Polyodon spathula (Mississippi paddlefish): 121315193
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Entry
121315193 CDS
T07273
Name
(RefSeq) protein fem-1 homolog C-like
KO
K25805
protein fem-1 homolog A/C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121315193
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121315193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
121315193
NCBI-ProteinID:
XP_041105185
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All DBs
Position
1:complement(19532328..19540272)
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AA seq
617 aa
AA seq
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MDLKTAVFNAARDGKLRLLQKLLENKAEDDISKLMAEKTNGATPLLMAARYGHLDLVEYL
LECCRAPVEIGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLEIVRYLVEHEADLEVANRHGHTCLMISCYKGHREIAQYILEKGADVNRKSV
KGNTALHDCAESGSLEIMKMLLKYGAKMEKDGYGMTPLLSASVTGNTNIVDFLTQHPQAS
KMERINALELLGATFVDKKRDLLGALKYWKRAMGVRFSDGSKILHKPEPKQLIMAYDYAR
EVNGVDELDNLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFDDLMGILSRSVL
EIERAVKQTQPPPDPAQLSKALSIILHLICLLEKVPCSAEQDHFKKETIYKFLKLHPCGK
NGYSPLHLAVDRNTTCVGRYPVCKFPSFQVTSILLECGADLNCRDEDNNSPLHIAAFNNH
PDIMNLLISSGTHFDSTNSFKQTACDLLDEKEVVKNLIQPINHTTLQCLAARAIVKHSLI
YRGQIPQKLEAFVLLHR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaagacggcggtgtttaacgcagcccgggacggcaagctgcggctgcttcaa
aaactgttggagaacaaagctgaggatgacatttcaaaactgatggcagagaaaacaaac
ggggccacgccgttactgatggcagcccgttacgggcacctggatttagtggagtacctt
ttggagtgctgcagggccccagtggaaatcggaggatcggtaaactttgacggggagaca
atcgaaggggctccacctctgtgggcagcctcagcagctggacacttgaaggtagtgcag
tccctactgggtcatggagcctcggtaaacaacacaaccctcacaaactcgacgcctttg
agagccgcctgttttgatggacatctggagattgtgaggtacctggtagagcatgaggcg
gacctggaagtggcaaatcgtcatgggcacacatgcctcatgatttcttgttacaaagga
catcgggaaattgcacaatacatactagagaaaggggccgatgtcaataggaaaagcgta
aaaggaaatacagccttgcatgactgtgcagaatcaggaagtctggaaatcatgaaaatg
ctgctaaagtatggtgctaaaatggagaaggatggctatgggatgacccccttgctgtca
gccagtgtgactggcaacacaaacattgttgacttcctcacccagcacccgcaggccagt
aaaatggaaaggatcaatgctttggagttgctgggggccactttcgtggacaaaaagaga
gaccttttgggggctctaaagtactggaagagggccatgggtgtgaggttcagtgacggc
agcaaaatcctccacaagccagagccaaagcaactgatcatggcctatgattacgccagg
gaagtgaatggcgtcgacgagctcgacaacctaattgcagacccagacgagatgaggatg
caggccctgctcattcgagagcgcatcctggggccttctcacccggatacgtcttattac
attcgttacaggggggctgtatacgcagactctggtaactttgagaggtgcataaacctg
tggaagtatgctctggacatgcagcagagcaacctggaccctctgagtccaatgacagcc
agtagcttgctctcatttgctgaactcttctccttcatgctacaagatcgtgccaagggg
cttttggggacatctgtgtcctttgacgacctcatgggcatcctctccagaagcgtgttg
gaaatcgagcgagctgtcaagcagacgcagccccctccagacccggctcagcttagcaaa
gcactgtctataattctgcacttgatttgcttgctagagaaggttccttgcagtgctgag
caggaccacttcaagaaggagaccatctacaagttcctcaagcttcacccatgtgggaag
aatggctacagccctctccacctggctgtggacaggaacaccacctgcgtggggcgctat
ccggtctgcaagttcccctccttccaagtcacgtcaatcctattggagtgcggggcggac
ttgaactgcagggatgaggacaacaacagccccttgcacattgccgccttcaacaatcac
ccagacatcatgaacctcctcatttcctctgggacccactttgacagcaccaactccttc
aagcagactgcctgtgacctgctagatgagaaggaggtggtaaagaatttgatacagccc
atcaaccacaccaccttgcagtgtctggcagcacgggccatagtaaaacacagccttatt
tataggggacagattcctcagaaactagaggcctttgtgttgctccacagatga
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