Polyodon spathula (Mississippi paddlefish): 121315245
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Entry
121315245 CDS
T07273
Name
(RefSeq) AP-3 complex subunit sigma-1-like isoform X1
KO
K12399
AP-3 complex subunit sigma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121315245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315245
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121315245
Endosome - Golgi transport
121315245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
ARM_KDM8_N
Motif
Other DBs
NCBI-GeneID:
121315245
NCBI-ProteinID:
XP_041105224
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All DBs
Position
1:19592909..19627133
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AA seq
193 aa
AA seq
DB search
MIKAILIFNNHGKPRLSKFYEHYSEDIEQQIIRETFHLVSKRDENVCNFLEGGMLIGGSD
NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL
SEMVMGGMVLETNMNEIVTQVDAENKMEKSEAGLAGAPARAVSAVKNMNLPEMPRNINIG
DISIKVPNLPSFK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagccatcctcatattcaataaccacggcaaaccccggctctccaaattctac
gaacactatagtgaagatatagaacagcaaattatcagagaaacattccacttagtctca
aaaagagatgaaaatgtttgtaatttcctggaaggtggaatgttgattggagggtcagac
aacaagcttatttacaggcattacgctacattatattttgtcttctgtgtggattcttca
gaaagtgaactgggaatcttagatctaattcaggtatttgtggaaacactagacaaatgt
tttgagaacgtctgtgagctggatttaattttccatgtggacaaggttcacaatatcctt
tctgagatggtaatgggaggaatggtgttagagacgaatatgaatgaaattgtcactcag
gttgatgccgagaacaaaatggagaagtctgaggctggtctagcaggggctccagcgcgg
gctgtgtctgctgtaaagaatatgaacctcccagaaatgcctcgaaatataaacattgga
gatatcagcataaaagtgccaaacctaccctcctttaaataa
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