Polyodon spathula (Mississippi paddlefish): 121315274
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Entry
121315274 CDS
T07273
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121315274
NCBI-ProteinID:
XP_041105251
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Position
1:complement(19750837..19803612)
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AA seq
1034 aa
AA seq
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MRSEALLLYFTLLQIAGAGFPEDSEPISIAHGNYTTQYPAFVGHKPGRNNTQRHKLDIQL
IMIMNRTLYIAARDHIYTVDMDTSQSEEFFFNKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQKNNDTLFVCGTNAFNPSCKTYKMDSLDIHGEEISGMARCPYDAKHANVALFAND
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDYIYFFFREIA
VEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVMATFSTPYNSIPGSAVCAYDMEDVANAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGSALLEKYKSSNEFPDDTLNFIKMHPLMDESVSSIANRPWFLKTMVRYRL
TQIAVDNAAGPYQNHTVVFLGSEKGIILKFLAKMSSGFLNDSVFLEELNVYNPEKCSIDG
VEDKRIVGMRLDKKGNSLFVAFSSCVVKVPLARCEWHGKCKKACIASRDPYCGWVKEGAC
TEVLPNTKLAFEQDIELGNTDGLGDCQNSFVALNDSPTSPHDNEKSRDTVRHGQSSSPFL
TTSRSPIREGHSNRGRMVDQKDPMVSSDKKDPYMAVPSHNHQDTNGVIRESYHKGHDQLV
PVTLLAIAVILAFVMGAIFSGITVYCVCDHRRRDVDMVRRKDRDSVHLRRGSMNSVTKLT
GIFETQSKDPKPEAILTPLMHNGKMCTPNGNAKLLIKADQHHLDLTALPTPESTPTLQQK
RKPSRGSREWEMNQNLINACAKDLASMASPVIPTDLPLRASPSHIPSVVVLPITQQTYRH
DYLDQPHRVEMTQMSLEDQNATLEYKAIKEHLSSKSLNLVENNTMPPRVPQREASLGPPT
PVPQMGKRLEVHSSVYGHEYKRGYPANSQQKNHQTSTLKRHNTNSSNSSHLSRNHSFNRV
ENPPPAPQRVDSIHMNAVSSQMQAVTVSRQPSMSSYSSLPRSGVKRTPSLKPDVPPKPSL
SPLSANINPNDACT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggcgttgctgctatattttacactactacagattgctggggctggtttc
ccagaagactctgagccaatcagtattgcacatggcaactatacgacacaatatccagct
tttgttggtcacaagccgggaagaaacaacacgcaaaggcataagctggacatccagctg
atcatgataatgaacagaacactctacattgctgctagggatcatatttatactgttgat
atggatacatcacagtcagaagaatttttttttaacaaaaaattgacatggaagtctaga
caagctgacgttgacacttgcagaatgaagggaaaacacaaggatgaatgtcataatttt
atcaaggtgttgctgcaaaaaaacaatgacaccttgtttgtgtgcgggacaaatgccttt
aacccgtcttgcaaaacctacaagatggattccttggatatccatggcgaggagatcagc
ggaatggccaggtgcccctatgatgcaaagcatgcaaatgtggccctgtttgctaatgat
aagctttactctgccacggtaacagatttcctagcaatcgatgctgtcatttatcggagt
cttggagacagtccaactttgcgaacagtcaaacacgactcaaaatggttgaaagagccg
tactttgtgcaggcagtgaattatggcgactacatctatttcttctttcgggaaatcgct
gtggagtacaacagcatggggaaggtggtgttccccagggttgcccgggtgtgtaagaat
gatcggggaggctctcaaagggtgctggagaaacagtggacctcgttcctcaaagcccgc
ctcaactgctctgtccctggggattcacacttctacttcaacatcctccaggcagtgacc
gacgtcatccggataaacggacgcgatgttgtcatggctaccttctcaacaccttataac
agcatccctggctcagcagtctgtgcttatgacatggaagatgttgctaacgcctttact
ggtagattcaaagagcagaagtccccagactccacgtggacgccagtccctgaagagaaa
gtacccaaaccaaggcctggttgttgtgccggatcagcattgctagaaaagtacaaatct
tccaatgaattcccagatgacaccttgaacttcattaaaatgcaccccttaatggatgag
tcggtatcttccattgcaaacagaccatggttcctaaagacaatggtcagatatcggcta
acccagattgctgtagataatgctgctggaccttatcagaatcacactgttgttttcctt
ggatccgagaaaggcattattttaaaattcctggccaaaatgagcagcggtttcctaaat
gacagtgtattcctggaggagctgaatgtctacaacccagagaaatgcagcattgatggt
gtggaggacaagaggattgttggtatgcggctggacaagaagggcaattctctttttgtg
gctttctcctcctgtgtcgtgaaagtaccactcgcaagatgtgagtggcatggcaaatgc
aaaaaggcttgtattgcgtcacgtgacccttactgtggatgggtgaaagaaggagcgtgc
acagaagtcttacctaacaccaaattggcatttgagcaggacattgagctgggcaacaca
gatgggcttggcgactgccaaaattcttttgtggcgctcaatgacagtccaaccagtcca
catgataatgaaaagtctcgagacactgtgaggcatggccaatcaagctccccttttctc
accacctcccgttctccaatcagagaaggacacagcaaccgtgggcgcatggttgatcag
aaagatccaatggtctcctctgataagaaagacccatacatggcagtcccatcccataat
caccaggatacaaatggagtgatccgggagagctaccacaagggccatgaccagcttgtt
cctgtcaccctgttagcgatagcagtcatccttgcttttgtgatgggagccatcttctct
gggataactgtctactgtgtgtgtgatcaccggagaagggatgtggatatggtgcgtcgg
aaggacagagactctgtccatttacggaggggctctatgaacagtgtgaccaagcttact
gggattttcgagacccagtctaaggatcctaaaccagaagccattctaaccccactgatg
cataatggcaagatgtgtactcccaatggcaatgccaagttgttgatcaaagccgaccag
catcacctggacctcaccgctctgcccactcctgagtccacacctaccttacaacagaag
agaaaacccagtcgaggcagccgggagtgggagatgaaccagaacctgataaatgcatgt
gcaaaagacttggcctccatggcttccccagtgatcccaactgatctccctctgcgtgca
tctcccagccacattcccagcgtggtggtcctccctatcacgcagcaaacctatcggcac
gactacctggaccagccacatcgggtcgagatgacacagatgtccttggaagaccagaat
gccacactggaatacaaagctatcaaggagcacctgagcagtaaaagcctgaatttagta
gaaaataataccatgcctccaagagttccccaaagagaggcatcgctaggacctcccact
cctgtacctcagatgggcaagcggttagaagtgcattcttctgtgtatggtcacgaatac
aagaggggctaccctgctaactctcaacagaaaaaccatcaaacgtccactctgaaaaga
cacaatactaactcttcaaattcttcacatctttcaagaaaccatagttttaacagggta
gaaaacccaccccctgctccacagagagtggactccatacatatgaatgctgtgtcgtct
cagatgcaggccgtgactgtatctagacagcccagcatgagctcatacagttctctgccg
aggtcgggggtgaaacgcacaccttccttaaagcctgatgtaccacctaaaccctcatta
tcacccctttcagcaaacatcaaccctaacgatgcatgtacataa
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