Polyodon spathula (Mississippi paddlefish): 121315310
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Entry
121315310 CDS
T07273
Name
(RefSeq) homeobox protein OTX1 B-like
KO
K09326
homeobox protein OTX1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315310
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121315310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
121315310
NCBI-ProteinID:
XP_041105284
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All DBs
Position
5:complement(61605725..61609256)
Genome browser
AA seq
321 aa
AA seq
DB search
MMSYLKQPPYGMNGLGISGAMDLLHPSVGYPATPRKQRRERTTFTRSQLDILEALFAKTR
YPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGAKARPAKKKSSPTRESTGS
DSSGQFTPPTVSSSGSSSSASSTSSNTGISNTSTSISNPVSSIWSPASISPGSVPPVAIP
ESLPPTSASCMQRSVSSASTASYPMTYSQATGYSQGYPAPSSSYFSDCSSYLTPMHSHHH
PHQLSPMAPSSMSGHPHHHLSQSSGHHHHHHHHHQGYTGAGLAFNSSDCLDYKDQSSWKL
NFNTTDCLDYKDQAAWRFQVL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcctccttacggaatgaacggactgggcataagcggtgcc
atggaccttctgcatccttctgtcggataccctgcgactccaaggaaacaacggcgggag
aggacaactttcacgcgctcccagctagacattctggaagcgctttttgccaaaacacga
tacccggacatatttatgagggaggaagtagctttaaaaataaatttacccgagtccaga
gttcaggtgtggtttaaaaaccggcgtgcaaaatgccgccagcagcaacagagtggaaac
ggcgccaaggcaaggccagccaagaaaaaatcatccccgaccagggagagcactggctcg
gacagcagcggtcagttcacccctccaactgtgtccagctctgggtcgtcctcttcggcc
agctccacctctagtaacactgggatcagtaacacctctacctccatcagcaacccagtg
tcgtccatctggagcccagcttccatctctcctggttcagtaccacctgttgccatccca
gagtctcttcctcccaccagcgcctcctgcatgcagcggtctgtctccagtgcttcaaca
gcctcctaccctatgacctacagccaggccactggttacagccaaggctacccagcccct
tccagttcttacttcagtgattgcagctcctacctgactcccatgcactcacaccaccat
ccccaccaactgagcccaatggctccttcctccatgtctggacatccccaccatcacttg
agccagtcctcaggccaccatcaccaccaccaccaccaccatcagggttacacgggagct
ggattagccttcaactcctctgattgcctggattacaaagaccagtcgtcttggaaactc
aacttcaacacaacagactgcttggactacaaagatcaggcagcctggaggtttcaagtc
ttgtga
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