Polyodon spathula (Mississippi paddlefish): 121315321
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Entry
121315321 CDS
T07273
Name
(RefSeq) pulmonary surfactant-associated protein D-like
KO
K03991
mannose-binding lectin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121315321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315321
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121315321
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
Opsonins
121315321
Lectins [BR:
pspa04091
]
C-Type lectins
Group 3: Collectins
121315321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
121315321
NCBI-ProteinID:
XP_041105289
LinkDB
All DBs
Position
5:complement(66045203..66049239)
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AA seq
235 aa
AA seq
DB search
MIMTQILPIVVALLILQMHLGLTEDQDQINHCLRGRDGRDGRDGKEGAIGPKGEKGDRGE
KVQGPPGKAGPYVKGEKGEPGSPGTPMYEKRITELETELKKLKDTYSAHEKRFIFTVWST
SGSIVFGSRKDSATFEEGLKICSEAGGQIATPKSQSENDAIVEIVKATNVAYLGVNDRET
EGKFVDLNNQPLKFTKWKTGEPNNSANSEDCTILLPDGVWNDVPCQRKYIIICQF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgactcaaatactaccaattgtagtggccctgcttatactacagatgcatctt
ggtttgactgaagatcaagaccagataaaccattgtttacgaggaagagatgggagagat
gggagggatggaaaagaaggagcaattggtccgaaaggtgaaaagggggatagaggagaa
aaagtccagggtcctccagggaaagctggtccatatgtaaagggtgaaaagggggaacca
ggatcaccaggtacacctatgtatgaaaaacgcatcactgaattagagacagagctcaag
aaactgaaggacacttactctgcccatgaaaaacgcttcatctttacagtttggagcaca
agtggtagcatagtctttggatccaggaaagactcagccacttttgaagagggcttgaaa
atctgtagtgaagccggtggacaaattgccactcctaagagccaatctgaaaatgatgcc
atcgttgagatcgtcaaagcaactaatgttgcataccttggcgtgaatgacagagaaaca
gaagggaaatttgtagacttaaataatcaaccattaaagtttacaaaatggaaaactggt
gaacctaataacagtgcaaattctgaagattgcacaattttgcttcctgatggcgtgtgg
aatgatgtaccgtgtcaaagaaaatacataataatatgtcaattttaa
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