Polyodon spathula (Mississippi paddlefish): 121315408
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Entry
121315408 CDS
T07273
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315408
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121315408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_SB
Motif
Other DBs
NCBI-GeneID:
121315408
NCBI-ProteinID:
XP_041105400
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Position
5:complement(2054528..2059743)
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AA seq
357 aa
AA seq
DB search
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESPKQQPPQPALPYNHIYQYPYPNPMSPTGTKMGNHPGVA
VSAGHVSISRAWPSVHSVSNILGIRAFMDPTGAIAGTEGSYQPKIDDWSSVNRTSFSTAH
GVNCLDKSSIEPDIKYAQPASTLSSFVPACAYSSNQYGVYSAPAGGYVTAAHHWQSQSAS
LSHPASAMTMHGGEIHSPMAFKLPPRDGHRKPPSPLSKQQHDALNNVHGHTIPASSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacttatggagaggtgaatcagcttggcggtgtgtttgtcaatggaagaccc
cttcctaatgccatcaggctcagaattgtggagttggcccagcttgggatcagaccctgc
gatattagcagacagctaagggtttcccacgggtgtgtgagcaagattctggctcgatac
aacgagactggctccatcctacccggggcgatcggaggcagcaaacctagggtcacaacc
cccaacgtggtgaaaaatataagggactacaagcaaggggaccctggcattttcgcttgg
gagatccgcgacaggcttcttgcagatggagtctgcgacaagtataacgttccctcggtc
agctcaataagcaggattttaaggaacaagattggaaatctctctcaaccgaaccaatac
gaatcccccaagcagcaacctccccagccagccctgccttacaaccacatttaccaatat
ccgtacccaaacccaatgtcacccaccgggaccaaaatgggcaaccatcccggagtcgcc
gtctccgcaggacatgtcagcatttcgagagcctggccctcagtccactctgtcagcaac
atcctgggaataagagcgtttatggatccaacaggagctattgctggtacagaaggatct
tatcagccaaaaatagacgattggagtagtgttaacaggacctcgttttcaaccgctcac
ggcgtgaattgtcttgataaatcctctatcgagcccgatattaaatatgcacagccggct
tcaaccctgtccagttttgtcccagcttgtgcttattcttccaatcagtacggagtgtac
agcgcgcctgcgggtggctacgtgaccgcggcgcaccactggcagtctcaaagcgcgagc
ttgtcccacccagcgagcgctatgactatgcacggcggagaaatccactctccaatggcc
tttaaacttcctccaagagacggacaccgaaaacctcccagtcccttaagcaaacagcag
cacgacgctttgaataacgtgcatggacacacgatccccgcctcgtcttcataa
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