Polyodon spathula (Mississippi paddlefish): 121315496
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Entry
121315496 CDS
T07273
Name
(RefSeq) trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315496
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121315496
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_12
TPR_17
ANAPC3
TPR_16
TPR_14
TPR_8
Coatomer_E
TPR_11
Motif
Other DBs
NCBI-GeneID:
121315496
NCBI-ProteinID:
XP_041105560
LinkDB
All DBs
Position
5:7165541..7191278
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AA seq
795 aa
AA seq
DB search
MDSSNSEAKDAKPVSLDINGKRESQQRDQTSHQETSSRHPEVLFQEENIDLDGEAFITPQ
EDISESFMDKLNDQMMESVLISDSPSNSEDDLGQMDSLQDILEQDEEKENFGIKETENKE
NHETTGEKTKLESLEEPEEISTITLTHDEKQEEPKEESKVVETPSQPTVDDYDLIKTDQQ
ESAESASSGKQSPKEETIPVCTIFSQSNLPKIQAQSLMPAGFEPAMVKSPSFGSGIETPN
KLLPLVCQPSPSLSKFFVDNGHSNPAADFFDSFTTSSSFISVSNPNANTPDSSIPEGLSS
LSSPTGVTPQEPATPTFFFGGAPPESPVKLSSAEITPQFSQIQAAFAGSDDPFATALNMS
EIDRRYNAWLPSEETRKVLISVATQQYNTVFIEKEQLTMPGLKFDNIQGDAVRDLMVRFL
GEQAAMKRQVLTVNSVEQSFVGLRQLISTKNWRAAVDLTGRLLTAHGQGYGKSGQPTSHT
TDSLQLWFVRLALLTKLSLFQNAEMEFEPFGNLDQPDLYYEYYPNAYPGRRGSMVPFSMR
ILHAELPQYLGKAQDSLDRLHSMKMIALKILDNLENELSEDGSMINITQENRQAAIQLWR
SRLCRVMYSMANCLLLMKDYVLAVDVYHSIIQYEPEQQPQLLSGIGRIFLQIGDIKTAEM
YFQDMENGFTTKGEDPNQSTLVLMNRAFVYLSQNNYGEAHSLFSEVLKIDPTNPVANNNA
AVCLLYLGKLKDSLKQLEGLVQQDPKRYLHESVLFNLTTMYELESSRSMQKKQALLESIA
CREGDSFNIQCLKLV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggatagttccaactcagaagctaaagatgcaaagcctgtatctcttgacatcaatgga
aaaagagaaagtcaacaaagggaccagacatctcaccaagagacgtcaagccgtcatcca
gaagtgcttttccaagaagaaaacattgaccttgatggggaagcatttattacgccacaa
gaggatatttcagagagcttcatggataagctcaatgaccaaatgatggaaagcgtcttg
atatcagactcgcccagtaacagtgaagatgatcttggtcagatggacagcttgcaagat
attttggagcaggatgaagaaaaggaaaactttgggataaaagaaactgagaataaagaa
aaccatgagactactggtgagaagacaaagcttgaaagtttggaagaacctgaagaaatc
tcaacgataaccttaacacatgatgagaaacaggaggagccaaaagaagagtcaaaagtg
gttgaaacccctagccaaccaacagtggatgattatgatttaattaagactgatcagcaa
gaatcagcagaatctgcgagttcaggtaaacagtcaccaaaggaggaaaccatcccggtg
tgtacgatcttcagtcaaagtaatctacctaaaatccaagcccagtctttgatgcctgct
gggtttgaaccggcaatggttaagtcgcctagttttggcagcggcattgaaacccctaac
aaactccttccattagtatgccagccaagtccaagtcttagcaagttttttgtagacaac
ggccattctaacccagcagcagacttctttgattcgtttacaacctcatcttctttcatt
tcagttagcaatcctaacgcaaacacccccgattcctcaataccagaaggactgtcatct
ttgtcctctccaactggagttactccccaagaacctgctacacccacctttttctttggg
ggtgcccccccagagtctcctgttaagctctcctctgctgaaattacacctcagttttca
cagatacaggctgcttttgcaggcagcgatgatccttttgccacagcccttaacatgagt
gaaatagacagaagatataatgcttggctcccatcagaagaaacaaggaaggttttgatt
tctgttgccactcagcagtacaacacagtgtttattgagaaagagcagctgaccatgcct
ggattgaagtttgacaacattcagggtgatgctgtcagggatcttatggtgcgttttttg
ggggagcaggctgcaatgaagaggcaggttttaacagttaactctgtggagcaatcattt
gtgggactaaggcagttgattagcacaaagaactggagggctgctgttgacctgactgga
agactactgactgctcacggtcaagggtatgggaagagtgggcagcctaccagccacact
acagattccctgcagctctggtttgtaaggctagcattactaaccaaattaagcctgttt
caaaatgccgagatggagtttgaaccatttggaaaccttgaccagccagacctttactac
gaatattacccaaatgcatatccaggacgcagaggttcaatggttccattctcaatgcgg
attttgcatgctgagctgccacagtatcttggaaaggcacaagattcccttgaccgcctg
cacagtatgaaaatgattgccttaaagattttggacaatttggaaaatgaactatcagaa
gatggaagtatgattaacataacgcaagagaacaggcaagccgctattcagctgtggagg
tcacgtctatgccgggtgatgtactccatggcaaactgtctgctactgatgaaggattat
gtgctagcagtagatgtgtaccactcaatcatccagtatgaaccagagcaacaacctcag
cttctaagtggaattggaagaattttcctccagattggtgacattaaaacagcagagatg
tatttccaggatatggagaatggattcacaacaaaaggagaggatccaaaccaaagtact
ttggttttaatgaacagggcatttgtgtacctaagtcagaataactatggagaagcacac
agtttgttttcagaggttttgaaaatagaccccactaaccctgtggcaaataacaatgct
gctgtttgcttgctttatttgggtaaattgaaagattccctgaagcaattagaaggatta
gtccagcaagatcccaaacgctaccttcacgagagcgttctttttaacctcacgactatg
tatgaactggagtcttcacgcagcatgcagaaaaagcaagctctgctggagtccattgcc
tgcagagagggagatagctttaacattcagtgtctaaagctggtgtag
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