Polyodon spathula (Mississippi paddlefish): 121315505
Help
Entry
121315505 CDS
T07273
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A isoform X1
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121315505
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121315505
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121315505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121315505
NCBI-ProteinID:
XP_041105578
LinkDB
All DBs
Position
5:7964970..8009767
Genome browser
AA seq
300 aa
AA seq
DB search
MTTARYRPTGDLALDPLVTCKLCLGEFPLEQMTTITQCQCIFCTLCLKQYVELLIKEGLQ
TAISCPDAACPNHGHLQENEIECMVAAEIMQRFKKLQFEKEVLLDPCRTWCPSSSCQAVC
QLKEMEPPALQLVQCTACNLEFCSACKANWHPEQVCQENVPVTSFLPGETSSFYKNDDDD
DDDDDDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLGSLDDDFLLIHYDKGPC
RNKLGHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPFVLCCKCKCSKGDDDPLPT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcaagatataggcctactggagatttggccctggaccctctagtgacctgt
aaactgtgccttggggaatttccattggagcagatgacaacaataacccaatgtcaatgt
atcttttgtacactgtgcctaaaacagtatgtggaactcctgatcaaagagggcctacaa
acggctattagctgtcctgatgctgcctgtccaaatcacggccatttacaagaaaatgag
attgaatgcatggttgcagcagaaattatgcaaagattcaaaaagttacagtttgaaaag
gaggttctgttggatccttgccggacctggtgcccgtcgtcctcctgtcaagccgtgtgt
cagctgaaagaaatggagccccctgccttgcagctggtccagtgcacagcctgtaacctg
gagttctgctctgcctgcaaagcaaactggcaccctgagcaggtctgccaagagaacgtg
cctgtgacatcattccttccaggagaaacaagttcattctataagaatgatgatgatgat
gatgatgatgatgatgatgatgctccgatcaagcgatgtccaaaatgcaaagtctatatc
gaacgtgatgaaggctgcgcccaaatgatgtgcaaaaactgtaaacatgccttctgctgg
tactgcctggggtctctggatgatgattttctattgatccattatgacaaaggaccatgt
cgcaacaaacttgggcactccagggcatctgtaatctggcacagaacacaagtggttggt
atttttgctgggtttggtctgttgctgttggtggcgtctcccttcctccttctggccact
ccatttgtcttgtgctgcaaatgcaaatgcagcaagggtgatgatgatccactgcctacc
tag
DBGET
integrated database retrieval system
