KEGG   Polyodon spathula (Mississippi paddlefish): 121315531
Entry
121315531         CDS       T07273                                 
Name
(RefSeq) splicing factor 3B subunit 6 isoform X1
  KO
K12833  pre-mRNA branch site protein p14
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121315531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121315531
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121315531
 Complex B
    121315531
 Complex C
   U2 SnRNP specific factors
    121315531
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_SRRT RRM_ACIN1 RRM_7 DUF8400
Other DBs
NCBI-GeneID: 121315531
NCBI-ProteinID: XP_041105635
LinkDB
Position
5:complement(10488015..10490448)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPESRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcggcaaaaagagctaatatccggttaccaccagaagtaaatcggatc
ctgtatattcgcaacctgccatacaaaatcacagccgaagaaatgtatgatatatttgga
aaatatggccccatcaggcaaatcagagttggcaacacgccagaatcaagaggaacagca
tatgtggtctatgaggacatctttgatgccaagaacgcatgtgatcacttgtcaggattt
aatgtctgcaacagataccttgtagtattgtactacaatgcaaaccgggctttccagaaa
atggacaccaagaagaaagaggagcaactgaagcttctcaaagagaaatacggaatcaac
acagatccaccaaaataa

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