Polyodon spathula (Mississippi paddlefish): 121315543
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Entry
121315543 CDS
T07273
Name
(RefSeq) intron Large complex component GCFC2-like isoform X1
KO
K09061
GC-rich sequence DNA-binding factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315543
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
ZIP only
121315543
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GCFC
WSD
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
121315543
NCBI-ProteinID:
XP_041105652
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Position
5:complement(11117205..11135055)
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AA seq
853 aa
AA seq
DB search
MFKKPNRNFRRRRADSSEEDETNRTREDEVRETREDVHVLAPARLSLQQHQGRGISCSSK
RESVSSKPASGSGDDPLENDVNDQTSEAATEQVETETVENKLKSENKEKIKSVLSFVEDK
VDGNGFKIKKPTANTIVFKAQKKKEQSRPADTNIVHSKGWEDRKAESSSGEGDDTEGDEM
SVGSGDDRSSNSSSRSSSSECGTGDIPDARRIQAAKRQRQLARAPGNYISLDTTWGNSPG
IKDQDDVDSNNEPDDHERSLQFTPKPKTLRQRIDAKIGRSESEDESTDSQEDDDQNLWEK
QQIRKGTNIPQISDIDNSRKVAKRFNSTASLPPVNLEMIKNRLTKKLESLGQVHRAHQRE
QEKIQQDTESAKTYLENLEDTSPCLRYKFYKEMRIYVQNLVDCLNEKIQMISEVESELHY
LLKHQAQAILNRRREEIKEESLYIQQLTSYTGSSNTGHMDSGERNKCLVEQKERRVRRSQ
RSENSENKAGPSEGLYSDDEVDPADVAEFQKKRDDVLCESQKIFDDVHEDFHNIKDVLSK
FDQWRGRFADSYYDAYVGLCLPKLLGPLISYQLIDWNPLKEDCEDFATMPWYTAVEQFCY
GREHEGSEIKDNPDMKTLPSVIEKTVVPKIQGFVEHIWDPYSSTQTRCLVRLCRKLEDDY
SLFQGSQKKVVQDFVNSVILRMRSSVDEDVFIPLYAKKFLEDRNSLQCQFQDRQFWSAVK
LLGNIMQWDGLVPEEALKELGFDKLLNRYILITLLNTQPGRVSVEKCKETVACFPKSWFK
DLSSRSTLPQLKHFSKHLHQTAHTLCKNSNECSIRELAAEVVVLLVTIKALDHAEDIIRE
YQMEDLKTSLGFS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaccgaaccgaaattttaggaggagacgggctgattcgagcgaggaagat
gagacaaacaggaccagagaggatgaagttcgagagacacgagaagacgtccacgtatta
gccccggcccggctgagcctgcaacagcaccagggcaggggcatctcttgtagttctaag
cgggagtcggtgagctctaaaccggcttcaggcagtggagacgatccgctggagaacgac
gtaaatgatcagacttcagaggccgcaactgaacaagtggaaaccgagacagtagaaaat
aaactgaaaagtgaaaacaaagagaagattaaaagtgtgctgagttttgttgaggataaa
gtggatggaaatggatttaagattaagaagccgactgcaaacactattgttttcaaagca
cagaagaagaaagagcaatctcgaccagcagatacaaatattgttcattctaaaggttgg
gaagatcgcaaggcagagagcagctctggagaaggtgatgacactgaaggagatgagatg
tctgtaggaagtggtgatgacaggagctcaaactcatctagtagatccagttcttcagaa
tgtgggacaggtgatatccctgatgcacggcgaatccaggcagctaaaaggcaacgtcag
ctggctagagccccagggaactatatttccttggacacaacttgggggaatagccctgga
ataaaggatcaagatgatgtagatagcaacaacgaaccagatgatcatgagcggagtctc
cagtttacaccaaaaccaaaaaccttaagacaaaggatagatgcgaagattggtaggagt
gaaagtgaagatgaaagtaccgacagccaggaagatgatgatcagaatctgtgggagaaa
caacagatcagaaaagggacaaacatcccacagatttcggatattgataattccagaaag
gttgcaaaacgtttcaattctactgcatcacttcctccagtcaatctagaaatgataaag
aatcgattaactaaaaagcttgaatctctagggcaggttcatcgagcacaccagagggag
caggagaaaattcaacaggacactgagagcgccaagacttatttagaaaacctggaagat
acctctccatgcctgcgctacaaattctataaagaaatgagaatatatgtacaaaacttg
gtagactgcctcaatgaaaagatccagatgataagtgaagtagaatcggagctacattac
ttgttaaaacaccaagcacaagctattttgaatcgaagacgggaagagatcaaagaggaa
tctttgtacatccaacaactcacaagttacactggttcatctaatactgggcatatggac
agtggagaaagaaataaatgcctagtagaacagaaggaaagaagggtgcgcagaagtcag
cggagtgagaactctgagaacaaagcagggcccagtgaaggcctatatagtgatgatgaa
gtagacccagctgacgtggctgagttccagaagaagagagatgacgtattatgtgagtct
cagaagatcttcgatgatgttcacgaggacttccataacattaaggacgtcctttcaaag
tttgatcagtggagaggcaggtttgctgactcctactatgatgcttacgttgggctttgt
cttcctaaacttctcggccctttaatcagctatcaacttattgactggaatcccctcaag
gaagattgtgaagactttgcgacaatgccctggtacacggctgtggagcagttttgttat
ggcagagaacatgaaggctctgagattaaggataaccctgatatgaaaacgttgccctca
gtcattgagaaaacagtcgttccaaaaattcaaggttttgtggaacatatttgggaccct
tattcatcaacacagacccgatgtctagtgaggctttgcaggaagctggaagatgactat
tcactgtttcagggttcacagaagaaagtagtacaggattttgttaactctgtaatcttg
agaatgagaagttcagttgatgaagatgtgtttattcctctttatgctaaaaagttccta
gaggacaggaattcattgcaatgtcaattccaggacaggcagttctggtcagctgtcaag
cttctaggtaatattatgcagtgggatggcttggtaccagaggaggctctaaaagaactg
gggtttgacaagctcctcaatcgctacattctgataactcttctgaatactcagcctgga
agagtcagtgtggagaagtgcaaggagacagtggcatgttttcctaagagctggtttaaa
gatctgagcagcaggtctacactgcctcagcttaaacacttcagcaagcacttacaccag
actgcacataccttgtgcaaaaacagcaatgaatgcagcatcagggagcttgcagcagaa
gttgtggttcttctagtaaccatcaaagctctggaccatgcagaggatattatcagggaa
taccagatggaagatctgaaaacttctcttggcttcagttaa
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