Polyodon spathula (Mississippi paddlefish): 121315602
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Entry
121315602 CDS
T07273
Name
(RefSeq) matrilin-3-like isoform X1
KO
K19467
matrilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121315602
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121315602
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
Matrilin_ccoil
VWA_2
FXa_inhibition
cEGF
EGF_CA
HSBP1
EGF_LRP2
EGF_3
VWA_3
EGF
hEGF
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
121315602
NCBI-ProteinID:
XP_041105766
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Position
5:complement(14874950..14885113)
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AA seq
399 aa
AA seq
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MKNNISAMKSLFGGLFYCFSLLVQVHGTNFRFYGYEPQRTSPAIRYAKPIARPELPLGTQ
AASNAISATVHGNNYRFYGHHYQLPQKISPPVWYPRPVIRPEQPVSTQSNAINTDTVRQC
KIRPLDLVFIIDSSRSVRPGEFEKVKIFISDMIDTLDIGQYATRVAVINYASTVKIEFHL
KTYFNKVDMKHAVSRIEPLSTGTMSGLAIRTAMNEAYTEKAGARPRPQNISRVAIIVTDG
RPQDKVQEVAAQARASRIEIYAIGVDRADMQSLRLMASTPLDEHVFYVETYGVIEKFTSK
FRETLCGLDICSLGTHGCEHICVSTTDSYYCKCRDGYILNEDKKTCSKEKKTDVPVDPCK
CESLVQFQTTVQSAIQSLTSRLDEMTKKVQQLEQRLRHF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacatttcagcaatgaagtctttattcggcggtctcttctactgcttctcc
ctcttggttcaagttcatggaactaatttcagattttatggctatgagccgcagaggact
tccccagctatccggtacgccaaacccatcgcaagacctgaactgccgctcggtacccaa
gcagcctcgaatgctatcagtgcgacagttcatggcaataattataggttttatggccac
cactatcaactgccccagaagatttctccaccagtctggtaccccagacctgtcatccga
ccagagcagccagtcagtacccaaagcaacgccatcaatacagacacagtgagacagtgc
aagatccgccccttggatctggtcttcataatcgacagctcccgtagtgtccgtccagga
gagtttgagaaagtcaagatcttcatttcagacatgatcgataccttggacattggccag
tatgccacaagagtggcagtcataaactatgccagcacggtcaaaattgagttccacctc
aagacctactttaacaaagtagacatgaagcacgctgtgtcccggattgagcccctttcc
acgggcaccatgagcggcttggcaattcggactgccatgaacgaggcttacacagagaag
gctggagcacggccacggcctcagaatatctccagggtggccatcattgtgacagatggg
cgaccccaggacaaggtccaggaggtggcagcccaggccagggcctctagaattgagatc
tatgcaatcggtgtggaccgggccgatatgcagtccttgaggcttatggccagcacaccc
ctggatgagcacgtcttctatgtggagacctatggcgtgatagagaagtttacctccaaa
tttagggagacgctatgcggtctggatatctgctcccttggaacccatggatgtgaacat
atttgcgtgagcaccacagattcctattactgcaagtgtcgggatgggtatatcttgaat
gaagacaagaaaacatgctcaaaggaaaaaaagacagacgtgcctgttgacccatgcaag
tgcgagtctcttgtgcagttccagacgacggttcagtctgccatacagtccctgaccagc
agactagatgaaatgacaaaaaaggtgcaacaactcgaacaaagactgcgccacttctag
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