Polyodon spathula (Mississippi paddlefish): 121315616
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Entry
121315616 CDS
T07273
Name
(RefSeq) fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121315616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121315616
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121315616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
121315616
NCBI-ProteinID:
XP_041105800
LinkDB
All DBs
Position
1:complement(22014685..22112420)
Genome browser
AA seq
2870 aa
AA seq
DB search
MRTQWVLKCLLGCIALSGIVVEKISGQNDGKNEKGQFKPDEEKEMTPNRVRRRGQQDVLR
GPNVCGSRFNSYCCPGWKTLPGGNQCIVPICRSSCGDGFCSRPNMCTCSSGQISPTCGSK
SIQQCNIRCMNGGSCAEDHCLCQKGYTGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVSNQMCQGQLSGTVCTKTLCCATIGHAWGHPCEMCPAQPQPCRRG
FIPNIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHKQSEATQRCEDINECST
IPGVCDDGECSNTVGSYFCTCPPGFVTSADGSHCIDQRVGTCFSSLVNGRCAQDLEGRFT
KMQCCCESGRCWALGSVPEMCPIRGSDEYRRLCIEGVPVGGFPSYRPERPGGGGDTFRPG
VNGFGPRVPTNGGTGPGPSLPEFATLNQTRTMDICKHLPNLCLNAHCIPTPAGYRCECNM
GFKLDGRGECIDFDECTSNPCTNGDCVNTPGSYYCKCHPGFQRTPTKQACIDIDECLQNA
VLCKNGRCVNTEGSFQCICNAGFELTSDGKNCVDHDECATTNMCLNGMCINEDGSFKCIC
KPGFALASNGRYCTDIDECHTTGICMNGRCINTEGSFRCECLAGLAVGVDGRFCVDTHMR
STCYGAIKKGVCVRPFPGAVTKSECCCANADYSFGEPCQPCPAKNSAEFQALCGSGIGFS
VDGTDINECALDPDICSNGVCENLRGSFRCICNIGYESDATGKNCVDIDECAVNRLLCDN
GLCQNMPGSYSCTCPKGYIFRQDSETCEDVNECDSSPCANGVCRNNAGSFSCECSPGSKL
DSTGLICVDSLKGTCWLNIQDGRCEVNINGATLKSECCATLGAAWGSPCERCEIDTACPR
GYARSKGVICEDVNECEVFPGVCPNGRCVNTKGSFQCDCREGLTLDGTGRMCVDVRVEQC
YLTFDEDECTQPVAGKFRMDACCCSIGSAWGTECEACPEPGSQEYEAICPRGPGFANRGD
ILTGRPFYKDINECKVFSSICSYGKCRNTIGSFRCRCDSGFALDMEERNCTDIDECRISP
DLCGSGTCVNTPGSFECECFEGYESGFMMMKNCMDIDECERNHMLCRGGTCENTEGSYMC
VCPPGHQLSPDGDACVDVNECDLSDNLCKNGKCVNMIGSYQCSCNPGYQATPDRQGCVDI
DECTIKNGGCDTQCSNSEGSYECSCNEGYALMPDKRSCGDIDECEDSPNICDGGQCTNIP
GEYRCLCFDGFMASMDMKTCIDVNECDLNPNICMFGDCENTKGSFICHCQMGYSVKKGTT
GCTDVDECEIGAHNCDMHASCSNIPGSFQCSCQEGWVGNGIKCVDLDECANGTQQCSPNA
RCLNTPGSYRCGCLEGFTGDGYTCSDVDECAENVNLCENGQCLNIPGAYRCECEMGFTPA
PDRKSCQDIDECSFQSICVFGTCKNLPGMFRCICDDGYELDRTGGNCTDIDECIDPINCV
NGLCVNTPGGYQCNCPSDFELNPTGVGCVDTRVGNCYLEFGYRGDGSLACSVEVGVGVSR
SSCCCSKGRAWGNPCEHCPAVNTTEYNTLCPGGEGFRPNPITIILEDIDECQELPGLCQG
GNCVNTFGSFHCECPAGYHLNEESRICEDIDECVTYPGICGPGTCYNTLGNYTCICPPEY
MQINGGNNCMDMRKSVCYRNYNGTSCENELAFNLTKRLCCCSYNVGKAWNKPCEACPIPA
TSEYHTLCGNIIPGFTFDIHTGKAVDIDECREIPGICANGVCINQIGSFRCECPTGFSYN
DLLLVCEDIDECSNGDNLCQRNADCINSPGSYRCECADGFKLSPNGACIDRNECLEIPNV
CSHGKCVDLQGGYRCACHNGFKATPDQKMCMDIDECKHQPCGNGTCKNTVGSYNCLCHPG
FELTHNNDCTDIDECRTLYGQVCRNGQCINSIGSFQCLCEEGYELTPDGKNCVDTNECLT
FPGTCSPGTCQNLDGTFRCICPPGYDVQNENCIDINECDEDPNICLFGSCINNPGSFQCI
CRPGFVLSDNRRRCFDTRESFCFTKFENGKCSVPKAFNTTKAKCCCSKMAKEGWGDPCEL
CPKEGEVAFQELCPFGHGTIPGIGDTREDVNECVENPGICSNGHCINTDGSFRCECPMGY
SLDYTGVHCIDTDECSIGNPCGNGTCTNVIGGFECDCDEGFEPGPMMTCEDINECTQNAL
LCAFRCINAYGGYECTCPAGYALREDRKMCKDLDECSEGLHDCESRGMVCKNLIGTFMCI
CPPGMTRRPDGEGCQDENECRSKPGICENGRCVNTVGSYRCDCNEGFQSGPTGTECIDHR
QGFCFIEVLQTMCQMSSSSRNLSTKSECCCDGGRGWGNQCELCPLPGTGHYKKLCPHGPG
YTTDGTDIDECKVMPNLCRNGQCINTMGSFRCLCKLGYTTDITGTTCVDVDECVQSPKPC
NFICKNTEGSYLCSCPRGYILQEDGKTCKDLDECQTKQHNCQFLCVNTIGGFTCKCPPGF
TQHHTACIDNNECASQPSLCGSKGICQNSPGSFSCECQRGYSLDSTGLNCGDVDECESSH
RCQHGCQNMAGGYRCGCPQGYTQHYQWNQCVDENECSNPNSCGSASCYNTLGSFKCACPS
GYSFDEFGSSCQDVNECMSFKTPCNYGCSNTEGGYLCGCPPGYYRVGQGHCVSGLGFNKG
QYLPPGAEAEDDNALSPEACYECKINGYSKKDGRKRRSTNETEPSEEEPISLASLDIDAP
LKLSLKISELNIHEHILELIPAIEPLTNRVRYAISSGNDVGLFRIHQREGLSYLHTTKKK
SLPGNYTLEITSIPLYKQKELQKLEDSKDRDYLMGELGESLRMRLQIELQ
NT seq
8613 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccagtgggtgttgaagtgcttgcttggatgtattgccttatcgggaatcgta
gtggaaaaaatatcagggcaaaatgatggaaaaaatgaaaagggccaattcaaaccagac
gaagagaaagagatgacacccaacagggtgagaagaagaggacagcaggatgtgcttaga
ggccccaatgtgtgcggatctcgattcaattcctattgctgccctggatggaaaacttta
ccaggaggaaaccagtgcattgttcccatttgccgaagcagctgtggtgatggattttgt
tcacgtcccaacatgtgtacttgttcaagtggacaaatctcgccaacttgtggatcaaaa
tccattcagcagtgcaacatcaggtgtatgaatggtggttcatgtgcagaggaccattgt
ctgtgccagaaaggttacacaggaacttactgcggacagcctgtgtgcgagaatggctgc
cagaatggagggcgttgcattggaccaaaccggtgtgcttgtgtgtacggatttacagga
ccacagtgcgaacgagactacagaactggaccatgtttcacccaggtgagcaaccagatg
tgccaaggccagctcagtggcacagtctgcaccaagaccctttgttgtgccactattggg
catgcctggggacacccctgtgagatgtgccctgctcagcctcagccctgtcgccgtggg
ttcatacccaacattcgaactggagcttgtcaagacgttgatgaatgccaggcgatccca
ggtctgtgccaaggtggaaactgcatcaatacagtcggttcatatgagtgcaagtgccct
gctggtcacaagcagagtgaggcaacccagaggtgtgaagatataaatgagtgcagcaca
atcccaggtgtctgtgatgacggagaatgctccaacacggttggcagctatttctgtacc
tgcccacctggctttgtaacatctgcagatggctctcactgtattgatcagagggtggga
acctgcttctccagcctggttaatggccgatgcgctcaggacctggaaggacgcttcacc
aagatgcagtgctgttgtgagtccggccgctgctgggccctgggttcagtgccagagatg
tgccccatcagaggttctgatgaatatcgcaggctgtgcattgaaggcgtaccggtagga
ggatttccttcttacaggcctgaaagacctgggggaggaggagacaccttcaggcctggg
gtgaatgggtttggtccaagagtacctacaaacggcgggactggacctggaccatcactt
cctgagtttgctactctcaatcaaacaagaacaatggacatctgcaaacacttacccaac
ctgtgcctgaatgcacactgcatccccaccccagctggctaccgctgcgagtgtaacatg
ggattcaagctggatgggcgaggcgaatgcatagatttcgatgaatgcacctccaacccc
tgcacaaacggagactgtgtcaacacacctggctcttattactgcaagtgtcatcctggt
ttccagagaacacccaccaaacaagcctgcatcgatattgatgagtgccttcagaatgca
gttctgtgtaagaatggtcgctgtgtaaacactgaaggtagttttcagtgcatctgcaat
gctggctttgagctaacttctgatggaaaaaactgtgtcgatcatgatgaatgtgccacc
accaacatgtgtctgaatggaatgtgcattaacgaagatggaagtttcaagtgcatctgc
aaacctggttttgccctggcttcaaatgggcgctactgcacagatattgatgaatgtcac
accacggggatctgcatgaatggccgctgtattaacactgaaggctcgttcaggtgtgaa
tgccttgcaggtctggccgttggggtagatggcagattttgtgttgacacacacatgcgc
agcacttgctatggagccatcaagaagggagtctgtgtccggccgttcccaggagcagtc
accaagtctgagtgctgctgcgccaatgcggattacagcttcggagagccgtgtcagccc
tgcccagctaaaaactcagctgaatttcaagcactctgtggcagtggaattggattctca
gtggacggaacagatatcaatgagtgtgcattggatcctgatatctgttccaatggagtc
tgtgaaaacctccgtggcagcttccgttgtatctgtaacattggatatgaatctgatgcc
actggcaagaactgtgttgacattgacgagtgtgcagtgaaccggctgctctgtgataat
ggactgtgccagaatatgcctggcagctacagttgtacctgccccaagggttacatcttc
agacaagactcagagacttgtgaagatgtgaacgaatgtgacagcagcccctgtgctaat
ggagtgtgtaggaacaatgctggatccttctcctgtgaatgttctcctggcagcaaacta
gattctactgggttgatctgcgtggacagcctgaagggaacatgctggctcaatatccag
gatggccgctgcgaggtgaacatcaacggggcgacgctcaagtctgagtgctgtgccact
ttgggagctgcttggggcagtccatgtgaacgctgtgaaatagatactgcctgtccaaga
ggatacgctagatcaaagggggttatctgtgaagatgtcaacgagtgtgaagttttcccg
ggtgtctgtcccaacggtcgctgtgtgaacacaaagggctccttccagtgtgactgccgt
gaaggcctgacgttggatggaacagggagaatgtgtgttgatgtacgtgtagagcagtgc
tatctgacatttgacgaggatgaatgcactcaaccagtggctggcaaattccgaatggat
gcctgttgctgctccattggctctgcctggggcaccgaatgtgaggcttgccccgagcca
ggcagccaggagtacgaggccatctgccccagaggaccaggctttgccaacagaggggac
attcttacaggcagacctttctacaaagatattaatgaatgtaaagtattttccagcatc
tgcagctatggcaaatgtcgaaacactattggcagttttagatgcaggtgtgacagcgga
tttgcactggatatggaggagagaaattgtactgacattgatgaatgtcgaatctcccct
gacctctgtggaagtggtacctgtgtcaacactccgggcagttttgaatgcgagtgcttt
gaaggatatgaaagtggattcatgatgatgaagaactgtatggatatcgatgagtgtgag
cgtaaccacatgctgtgccggggaggcacttgtgaaaacacggaaggcagctacatgtgt
gtttgtcctccagggcaccagctttcccctgacggagatgcctgtgttgatgtcaatgag
tgtgatctcagtgacaacctttgcaagaacgggaagtgtgtgaacatgatcggctcctat
cagtgctcctgtaatcctggataccaggcaactcctgacagacagggatgtgttgacatc
gacgagtgcacaattaaaaatggaggatgtgacacccagtgcagcaattcagaaggcagc
tatgagtgcagctgtaatgagggttacgccctgatgccagacaagaggagctgtggagat
atcgatgaatgtgaggatagccctaatatctgtgacggtggacagtgtactaacatccct
ggagagtaccgctgtctctgttttgatgggttcatggcatccatggatatgaagacatgt
atagatgtaaacgagtgtgatttgaatcctaacatctgcatgtttggggattgtgagaat
accaagggatccttcatctgccattgccagatgggttattcggtcaagaaggggacaact
ggatgcacagatgtggatgagtgtgagattggagctcacaactgtgacatgcacgcctcc
tgtagcaacatccctgggagcttccagtgcagctgccaagagggctgggtaggaaacggc
attaaatgtgtggatcttgatgaatgtgctaatgggacccaacaatgcagtccaaacgcc
agatgtctgaacacacctggatcgtaccgctgtggctgcttggaaggattcacaggggat
ggatacacttgttcagatgtggacgagtgtgccgagaatgtaaatctttgtgagaatggg
cagtgcctgaatattcctggggcgtaccggtgcgagtgtgagatgggcttcactccagct
ccagacagaaagtcctgccaagatattgatgaatgttccttccagagcatttgtgtattt
ggtacctgtaagaatctgccaggcatgttcagatgcatatgtgatgatggttatgaactt
gatagaacaggaggaaactgcacagacattgatgagtgtattgacccaataaactgtgtt
aacggactttgtgtgaatactcctggaggatatcagtgtaactgcccttctgattttgag
ctgaacccaactggagtcggttgtgttgacactcgtgttggtaactgctacctggagttt
ggctaccgtggagatgggagcctggcctgcagtgttgaggtcggggttggtgtcagtcgt
tcctcctgctgctgctcgaagggaagagcttggggaaacccctgtgagcactgcccggct
gtcaatacaactgagtataacacactatgccctggaggtgaagggtttaggcccaaccct
attacgattatattggaggatattgacgagtgccaggagttgccaggactgtgccagggt
ggaaactgtgtcaatacctttggcagctttcattgcgagtgcccagctggctaccacctc
aatgaagaaagccgaatctgtgaagatattgatgaatgtgtaacctatcctggtatctgc
gggcctggtacgtgctataacaccctgggtaactacacctgcatctgccctccagagtac
atgcagatcaacgggggaaacaactgcatggacatgaggaagagcgtttgctacagaaac
tacaacggaacttcctgtgagaacgaactggcattcaatctcaccaagaggctgtgctgc
tgttcctacaatgttggtaaagcttggaacaagccctgtgaggcgtgcccaatccctgca
acatcggaatatcacacactctgtggaaatatcatcccaggattcacctttgacatccac
actggaaaagctgttgatattgatgagtgtcgggagatccctgggatctgtgcaaatggc
gtctgcattaaccagattggaagcttccgctgcgaatgccccactggattcagctacaat
gacctgcttttggtctgtgaagatattgatgagtgcagcaatggggataacctctgtcaa
cgcaatgctgactgtatcaacagcccaggcagctaccgctgtgaatgtgctgatggattc
aaactctcccctaacggggcttgcattgatcgtaatgaatgcctggaaattcctaatgtt
tgcagtcatggtaaatgtgtggatctgcaaggaggctatcgctgtgcttgtcacaatggc
ttcaaggcaaccccagatcagaagatgtgtatggatattgatgaatgcaaacatcagcct
tgtggaaacggaacctgtaagaacacagtgggatcatataactgtctttgccacccaggc
tttgaacttactcacaacaacgactgcactgatattgatgagtgcaggaccttatatggg
caggtgtgtcgaaatggccagtgcatcaacagcattggctccttccaatgtctgtgtgaa
gagggctatgagctcacacctgatggaaagaactgtgttgataccaatgagtgtttgact
ttccctggaacatgctctcctggaacatgtcagaaccttgatggaaccttccggtgcatc
tgtcctccaggatatgatgttcagaatgaaaactgcattgacattaatgagtgcgatgaa
gaccccaatatctgcctttttggttcctgcattaacaatcctgggagtttccagtgcatt
tgccgaccaggattcgtcttgtctgataacagacgcaggtgctttgatacacgagagagt
ttctgcttcaccaagtttgagaatggaaagtgctctgtgccaaaggctttcaacacaacc
aaagcgaagtgctgctgcagtaagatggctaaagaaggctggggagacccctgtgaactt
tgtcctaaggaaggagaagtggcattccaggagctttgtccatttggtcatggtaccatt
ccaggcattggtgacacacgtgaagatgtcaacgagtgtgtggagaacccaggaatctgt
tccaatggccactgcattaacacggatgggtccttccgttgtgagtgcccgatgggatac
agcctggactataccggagtccactgcattgacactgatgaatgttcaattggaaatcct
tgtggcaatggtacctgcaccaatgtgattggtggatttgagtgtgactgtgatgaaggg
tttgagccaggcccaatgatgacctgtgaggatatcaacgaatgtacacaaaacgctcta
ctgtgtgctttccgctgtatcaacgcgtatggaggctacgagtgcacttgccctgccggc
tatgccctgagggaggataggaagatgtgtaaagatctggatgaatgctcggagggactc
catgactgtgaatccagaggcatggtctgcaagaacctgatagggaccttcatgtgtatc
tgccctcccggcatgacccgcaggcctgatggagaagggtgccaggatgaaaatgaatgc
cgctctaaacctgggatctgtgaaaacgggcgctgtgttaacacagttggcagctacagg
tgcgactgcaacgagggcttccagtctgggccgacaggcacggaatgcattgaccatcgg
caaggcttctgtttcattgaagtcctgcagaccatgtgccagatgtcctccagtagccgt
aacctctccaccaagtccgaatgctgctgcgatggaggccgaggctggggcaatcagtgt
gagctctgccccttgcctgggaccggccactacaagaagctctgcccccatggccctggc
tacactactgatggcactgatattgacgaatgcaaagtcatgcccaacctgtgtaggaat
ggacaatgtattaacaccatgggctccttccgttgtctctgcaaactgggctataccact
gacattacaggcaccacctgtgtggacgtggacgagtgtgtccagtctccaaagccgtgc
aacttcatctgtaaaaacacagagggcagttacctgtgctcatgcccacgggggtacatc
cttcaagaggatgggaagacttgtaaagatcttgacgagtgtcaaaccaaacaacacaac
tgccagttcttgtgtgtcaacaccatcggaggatttacatgcaagtgtccaccaggattt
acacagcatcacactgcctgtattgacaacaatgaatgtgcctcccagccttctctctgc
ggctctaaaggaatatgtcagaactctccaggcagtttcagttgtgaatgccaaagagga
tacagtcttgactccaccggcctaaactgtggtgatgtggatgagtgtgaaagcagccac
aggtgccaacacggatgccagaacatggcaggagggtaccggtgtggctgtcctcagggg
tacacgcagcactaccagtggaaccagtgtgtcgatgagaatgaatgttccaaccctaat
agctgtggctctgcctcttgctacaacacccttggcagcttcaagtgtgcctgtccgtct
ggttactcattcgatgaatttggcagcagctgtcaagatgtgaacgagtgtatgtccttc
aagaccccttgcaactatggctgttcaaacacagagggaggttacctctgtggttgtcca
cctggttattacagagtgggacaaggtcactgtgtatccggcttgggattcaacaaaggc
cagtacctgcctccaggggccgaagcggaggatgacaatgccctgtctccagaggcctgt
tacgagtgcaaaatcaatggctactccaaaaaagatggcaggaagaggagaagtaccaac
gaaactgaaccttcagaggaggaacctatcagcttggccagtttggacatagacgctcct
ctgaagctgagtcttaaaatctcagagctgaacatccacgagcacatcttggagctgatc
cctgcaatcgagccactcaccaaccgtgtgcgttacgccatctcctccggcaacgatgtc
gggctgttccgcatccaccagcgcgagggcctcagctacctgcacaccaccaagaagaag
tccttgccagggaactacacactggagatcaccagtatcccgctgtacaaacaaaaagaa
ctgcagaaactggaagacagcaaagacagagactacctcatgggggagctgggggaaagc
ctcagaatgagactacagattgagcttcagtaa
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integrated database retrieval system
