KEGG   Polyodon spathula (Mississippi paddlefish): 121315620
Entry
121315620         CDS       T07273                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121315620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121315620
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121315620
Spliceosome [BR:pspa03041]
 Complex B
  Other components
   Prp19 complex
    121315620
 Complex C
   Prp19-CDC5 complex
    121315620
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    121315620
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 121315620
NCBI-ProteinID: XP_041105804
LinkDB
Position
5:16060458..16086722
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMENYKALEPDFK
RLRQQHLDGDLRFEKEDRDRKKDKQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDSELEEVVKLGQASELARQTAEESGITNSASSALLSEYNVTNNAMALRTPKTPAAQD
RILQEAQNLMALSNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLATPFRTPTNGT
DGLTPRGALTPKPALGITPGRTPLRDKLNINAEEEMVDYNDPSYSKHLERESREQLRMGL
MGLPAPKNDFEIVLPENAEKELEEHETDESFVEDAAEIDMRKQAVRDAEREKELKQRHMA
VQRNFPRPSEVNETILRPLNVEPPLTEIQKAEEMIKKEMITMIHFDSLHHPYTDALGKKA
KGLGSGSNNAEHVIYLERNLYEKMQEDDLKKAAELLAHEMEVVKYGMGHGDLSIDAYNQV
WEECYSQVLYLPGQGRYTRANLSSKKDRIESLEKKLEINRGHMTMEAKRAAKMEKKMKIL
LGGYQSRAMGLIKQMNDLWDQIEQANLELHTFEELKKHEDTAIPRRQEALKEDVQRQQER
EKELQQRYADLLLEKETLISSKF
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggataatgataaaaggaggtgtttggcgaaataccgaggatgaaattcttaaa
gcagctgttatgaaatatggcaaaaaccagtggtcccgtatcgcttccctgttacacaga
aaatctgccaagcagtgcaaagctagatggtatgagtggcttgacccaagcattaagaag
acagagtggtcacgtgaggaggaggagaagctgcttcatttggctaagctgatgccaact
cagtggaggacgattgctccaatcattggaagaacagcagctcagtgtctggagcattac
gagttcctgctagacaaagctgcacagagagacaatgaggaggacactgctgatgaccct
cgtaagctcaaaccaggcgagattgatcccaacccagagacgaagcccgccaggcccgat
cctgttgatatggatgaagatgaactggagatgctttctgaggcaagagctcgtctggct
aacactcagggtaaaaaggctaaaagaaaagcaagagagaagcaactagaggaagccaga
cgacttgctgcgcttcagaagagaagggagctgagggcagctggcattgagatacaaaag
aaaaggaagaagaaaagaggtgtggattacaatgctgagatcccctttgaaaagaagcca
gctcaaggtttttacgacacttcaatggagaattacaaagccttggagccagactttaaa
aggctgcgccaacagcaccttgatggagacttgagatttgaaaaagaggacagagaccgc
aagaaagataaacagaagataaagaagaagaaggaatcagatctcccttctgctattttg
cagaccagtggagtatcagagtttacaaagaagaggagcaaattagttctcccagctcca
cagatttccgattctgaactggaggaagttgtaaaacttggacaagctagtgagctggct
cgtcagacggccgaagagtctggaattacgaattctgcgtccagtgcgttgctgtctgaa
tataatgtgaccaacaatgcaatggcactgcgcactccaaaaacaccagctgctcaggac
aggattctacaggaagctcagaacctgatggccctgtcgaatgtggatacacctctgaaa
ggtggtttgaacactccccttcatgagagcgacttctcaggagttactccccagagacaa
gttgtccagacacctaatacggtgcttgccacaccattcagaacgccaactaatggaaca
gatgggttgaccccacgtggtgcgctcacacctaaaccagctcttggaataacccctgga
agaacccctttacgcgacaagctcaacattaatgctgaagaggaaatggttgattataat
gatccatcctattctaagcacctggaaagagagtcacgtgaacaactgagaatgggcttg
atgggtttaccagcaccaaaaaatgactttgagatcgtccttccggaaaatgctgaaaaa
gaactggaagaacatgaaacagatgagagctttgtagaagacgcagcagaaattgacatg
aggaaacaggcagtcagagatgcagaacgcgaaaaggagttaaagcaaagacatatggct
gtacagaggaattttccaagaccatcagaagtaaatgagaccatcttaagacctttgaat
gtggaaccacctttaacagagattcagaaggcagaagaaatgataaagaaagaaatgatc
accatgattcactttgacagtttgcatcacccctacacagatgctttgggtaaaaaggct
aaaggactggggtctgggtcgaacaatgcagagcatgtaatatacctggaacgtaacctg
tatgaaaaaatgcaggaagatgatctgaaaaaggctgctgagctgttggcacatgagatg
gaggtggtgaagtatggcatggggcatggagatctctcgattgatgcttacaaccaggtg
tgggaagagtgctacagccaggtgttgtaccttcctgggcaggggcgatatacacgagcc
aatctgtccagcaaaaaggacagaatcgaatctctggaaaagaaattggagatcaacagg
ggacacatgacgatggaggcaaagagggcggcaaagatggagaagaaaatgaagatcttg
ctgggtggttatcagtcgagagcaatggggctcataaaacagatgaatgacctgtgggat
cagattgaacaggctaacctggaactgcacacatttgaggagctgaagaaacacgaggac
actgccatcccaaggagacaagaggcacttaaagaggatgtccagaggcagcaggagaga
gaaaaagaactacagcaaagatatgctgaccttcttctggaaaaagagactttaatatct
tccaagttttag

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