Polyodon spathula (Mississippi paddlefish): 121315636
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Entry
121315636 CDS
T07273
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19-like
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121315636
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121315636
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
TSP1_spondin
Reprolysin_3
TSP1_CCN
Pep_M12B_propep
Reprolysin_2
Reprolysin_4
ADAMTS_CR_3
Peptidase_M10
DUF3810
PLAC
Motif
Other DBs
NCBI-GeneID:
121315636
NCBI-ProteinID:
XP_041105836
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All DBs
Position
1:22279708..22376704
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AA seq
1139 aa
AA seq
DB search
MHLGHICGILQQLWFLTATVASGSHFFQDLESETVYPLVLPDAAPPSTERFDSQERYPNA
GSSSREVRSISKGEEYESQELYHWEPIGPQPLAFPGLRLKIPAFGNELHLILKRDSRFLS
RKFVVENRLKGRNAYLDNSTVTSSSSAERSCYYSGAVLNSAGSIASFSTCGGLMGFIQLN
EDFLFIEPLNRTLAVTGHAHRVYRRKRSMEEKVSEKHSSHKYCGVLPDKRKSKTRQLTEI
GRGKRYSYKLPHEYNVETLVVADPAMVSYHGSDAAKRFILTIMNMVFNLFQHKSLGVQMN
IRLTKLVLLHETPANMYIGHHGEKMLESFCKWQQEEFGKKNIHTDFSMSWREDLPSVDTA
VLITRKDFCVHKDEPCDTVGIAYLSGMCSEKRKCILAEDNGLNLAFTIAHEMGHNMGINH
DNDHPSCADGLHIMSGEWIKGQNLGDVSWSQCSREDMERFLRSKVSSCLLQTDPQSLNSV
ILPSKLPGMTYTADEQCQILFGPKASYCQKMQYVICSGLWCKVEGEKECKTKLDPPMDGT
ECDTGKWCKAGDCVRKALLPEHTDGEWSSWSAWGACSRTCNTGVSVRQRKCDNPRPSTEG
RDCPGVRVQYQVCRNTLCPAGVPSFRDLQCQSFNSPLYQKHSFQWYSVTDNEKPCTLFCS
TLGNDQPILLADKVLDGTLCGPQESDICANGTCQKISCDGILGSSAREDNCGLCNGNGKS
CKVIKGDFNHTRGAGYVEAVVIPAGARRIRVVEEKPAHSYLALRDASKHSINSDWKIEHP
GSFNIAGTTVHYVRRGLWEKISAKGPTTSPLHLLVLLFNDQNYGIHYEYTIPVDPPPENR
SAKTVEPLFMWTHSGWEDCHAVCGGGERKTKVTCTKIMNKTTSVVDNKKCRYLTKPEPQV
RKCNDQPCQTRWMMTDWTPCSRTCGKGSQARQVSCTQQLRNGTLIRAKERDCVGHKPAAA
QRCEGQDCMTVWEAGVWSECSVKCGKGARHRTVKCTNPRKKCDLSTRPREVEDCEDYSKC
YVWRTGDWSKCSVTCGKGMQSRVIQCMHKITGRHGNECFSSEKPAAYRPCHLQPCNEKNN
VNTITSPRLAALTFKCLRDQWPVYCKVIREKNLCQDMRWYQRCCETCRDFYAQKMQQRS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgggccacatctgtgggattttacagcagctgtggtttttgactgctacggta
gcttcaggttcacatttctttcaagacttggagtctgagacagtctaccctctggtttta
ccggatgccgctccgccgagtactgagagattcgacagccaggagagatatccaaatgca
ggcagcagttctcgggaagtccgttctatttccaaaggagaggaatacgaatcccaggag
ttataccactgggaacctattggaccgcagccactggcttttccggggctcaggctcaaa
ataccagcctttggcaatgagctccacctgattctcaagagggacagcaggtttttatcc
cggaaattcgtagtagagaacagactgaaaggtcggaatgcgtacctggacaattcaaca
gttacctcttcttccagcgctgaaagatcgtgttactacagcggggctgttctgaattct
gcaggatccatcgcctcctttagcacctgtggtggtctgatgggatttattcagctcaat
gaggactttctatttattgaacctctaaaccgcacactggcagtgacagggcacgcacac
cgcgtttacagacggaaacgatcaatggaggagaaagtctcagagaagcattcttcacat
aaatactgtggggttcttcctgataaaaggaaaagcaagaccagacagttgacagaaatt
ggcagagggaaaagatactcctataaattacctcatgaatataacgtggagaccttggtt
gttgctgaccctgccatggtcagctatcatggttctgacgctgcaaagagattcatcctc
acaataatgaatatggtttttaatctctttcaacacaagagccttggagtgcaaatgaac
attcgactgacaaagcttgtgctgcttcatgagactccagccaacatgtacatcgggcac
catggagaaaagatgctggagagtttctgtaagtggcagcaggaagagtttggaaagaag
aacattcacactgacttctcaatgagctggagggaggatttaccgtccgttgacacagct
gtattaatcaccagaaaggatttctgcgtacataaagatgaaccatgtgacactgtaggt
atagcatacttaagtgggatgtgcagtgagaagagaaagtgcatccttgctgaggataat
ggacttaatctggcatttacaatcgctcatgagatggggcacaacatggggataaatcat
gacaatgaccacccgtcctgtgcagatggcctccatatcatgtctggggagtggattaaa
ggacaaaaccttggagacgtctcctggtctcaatgcagcagagaggacatggaaaggttt
ctcaggtcaaaggtgagcagttgtttgctgcagacagatccccagagcctcaattctgtg
attctgccttccaagctacctgggatgacttacactgcagatgagcaatgtcagattctg
tttggaccaaaagcctcttattgccagaaaatgcagtatgtaatttgctctgggctctgg
tgcaaagtcgagggtgagaaagagtgtaagacgaaattggatccacctatggacggaaca
gagtgtgacacaggaaagtggtgcaaagctggggattgtgtcagaaaggctcttttacct
gagcacacagatggggagtggagttcatggagtgcatggggagcctgcagcagaacctgt
aacaccggggtcagtgtccgtcaacgcaagtgtgataatcccagacccagcactgaaggt
agagactgtcctggtgtcagagtgcagtatcaagtgtgccggaacactctctgtccagca
ggggtgccaagcttcagggatttacagtgccagtcctttaacagccctttgtatcagaag
cactcgttccagtggtattctgtcacagataatgagaaaccctgcactttattctgctcc
acattggggaacgaccagccaatactgctggctgacaaagtacttgatgggactctgtgt
ggacctcaggaatcagatatctgtgcaaatggcacgtgtcagaaaatcagctgcgacggt
atactgggatcatcagccagagaagataattgtggattgtgcaatggaaacggcaaatca
tgcaaagtcattaaaggagatttcaaccacaccaggggggcaggttatgttgaagcggtg
gtgataccagcaggagccagaagaatcagagtggtggaagaaaaacctgcacacagctac
ttagctctacgggatgccagtaaacactccatcaacagtgactggaagattgaacatcca
ggttcatttaacattgctgggacaacagtccactatgtcagaagaggattatgggagaaa
atctctgccaaaggacccactacttctccgctccatcttttggtgctgctgtttaatgac
caaaattatggaatacattatgagtacaccattcctgtagaccctcccccagagaaccgg
agtgccaagaccgttgagcctctcttcatgtggacgcactctgggtgggaggactgccat
gctgtgtgtggtggaggagaaaggaaaacaaaagttacttgcaccaagatcatgaataag
actaccagtgtggtggacaacaagaagtgccgctacctgactaaacccgagccacaagtg
cgcaaatgcaatgaccagccctgccagacaaggtggatgatgacagattggactccttgc
tcaaggacttgtggaaagggatctcaggctcgtcaggtgtcctgcactcagcagctacgg
aatgggactctcatcagggctaaagagcgggactgtgtgggacacaagcctgctgcggcc
cagcgctgtgaggggcaggactgtatgacagtgtgggaggctggagtctggtccgagtgc
tctgtaaagtgtggcaaaggggcccgccacaggactgtgaaatgcaccaatcctcgcaag
aaatgcgacttgtccacacgccccagggaggtggaagactgcgaggattattccaagtgc
tacgtctggagaacaggagactggtccaagtgctcagtaacctgtggcaagggaatgcag
tccagggtaattcagtgcatgcacaagatcactggaaggcatggaaatgaatgcttctca
tctgagaaacccgctgcttaccgaccttgccatctacaaccctgcaatgagaaaaataat
gtgaacaccatcacctcgcctagactggctgccttaacattcaagtgcctacgggaccag
tggcctgtctactgtaaagtcattagagagaagaacctctgtcaggacatgaggtggtac
cagcgctgctgtgagacctgtagggacttttatgcacaaaaaatgcagcaaagaagttga
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