Polyodon spathula (Mississippi paddlefish): 121315700
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Entry
121315700 CDS
T07273
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2-like
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315700
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
121315700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
121315700
NCBI-ProteinID:
XP_041105963
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All DBs
Position
5:complement(20306757..20397742)
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AA seq
931 aa
AA seq
DB search
MMAAAVERGGVRAAVLNHGSGGGVLSGLAVTPAAPGAGAGTAVGAGAGAGGGGSGSGCSG
PVPVPMNLFATWEIDRSSPSCVARLCSLTLKKLIVLKELDKELNSVVIAVKIQGSKRILR
SNEYLLPPSGLMETDLELTFSLQYPHFLKRDANRLQIMLQRRKRYKNRTILGYKTLAVGV
INMAEVMQHPTDGGQILGLHSNVKDAPVRAAEISVYSLSSQPIDHEYGSVPAGPKTKASD
RSPDIDNYSEEEDDSFSSEQEASDDAVHGQDLYYEEDEVRKSKKSRRKMIRTTSMTRQPN
FKQKFVALLKRFKVTDEVLDSDPVDQTQEVEEDLDLLYDSLEVYNPSDSGPEMEDNESVL
STPKPKLKPFFEGMSHSSSQTEIGSLQSQKSQNRDHAIPTGEFLACEKSKPAPSRYPEEV
IVESTPGEAEEEDLGTGSASTWDTSTDKLTSSVGKLSKTESQNLVSPSKVEIKQHRRPRS
TSMKDRQNSKAQIDRTNSVDSESSPDSRLNTQVPRKSVYDQLNQILICDEQLPESIILIN
TTDWQGQYLSEILHEQNQPIVSTCSAADVQAAFNTIVTRIQRFCNCNSQMPHTIKVAVAG
DHSYLSAILRFFVEQLANKTPDWLNYIRFLIIPIGCHPLAKYLASFDSKFSNIFMDTAWR
EIFSKTEPPTSDNIDIAGRVSQYILGANASHQFPISEAMLTYKKKSPDEDSCQKFIPFIG
VVKVGIVEPNLSASVDSDDATVCNVNLLTSPPTSAGSTYGKEMTSTPPPSPSVSSGLSGA
GSPCLGGEVMGLQVDYWTSQGPEKKKDGEKRDVGMKNTLKSNFRSLQVSRIPSSGELTAP
ATMSMTVVTKEKNKKVIFLSKKPKEKELDSKSQVIDGISRLICTAKHQHTMLKVSIDGVE
WNDVKFFQLAAQWPTHVKHFPVGILGYTKPV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctgtggaaagaggtggggttcgtgcagccgtcttgaaccatggcagt
ggcggtggcgtcttatcgggattggcggttacaccagcggcaccaggagcaggagcagga
acagcagttggagctggagccggagccggaggtggaggttctggttcagggtgctcgggt
ccagtcccggttcctatgaacctgttcgctacctgggagatagaccgctcgtccccaagc
tgtgttgcgaggttatgtagcctgactctgaaaaagctgattgtgcttaaagaactggac
aaagaactcaactctgttgtgattgctgtgaaaattcagggttcaaaacggatcttgaga
tcaaacgagtatctccttccacccagtgggctgatggagaccgatctggagctgacattc
tctttacaatatccacatttcctcaagagagatgcaaacaggcttcagataatgttacaa
cggaggaagaggtataaaaaccgcactattctgggctacaagacactggctgtgggagta
atcaacatggctgaggtaatgcaacaccctacagacggaggtcagattctaggtctccat
agtaatgtgaaggatgccccagtccgagctgctgagatcagtgtgtactctctctccagc
cagccaattgaccacgagtatggcagcgtgccagctggaccaaaaacaaaagcgtcagat
cgatcgcctgacattgataactactccgaggaagaagacgacagcttttcatctgaacag
gaggccagtgatgatgctgtgcacggccaggatctgtattatgaagaagatgaagtcaga
aaatctaagaaatcccggaggaaaatgatcagaacgacgtctatgacccggcaacccaac
ttcaagcagaagtttgtagccctactgaagaggttcaaagttacagatgaggttctggat
tctgacccggtggatcagacccaggaggtagaagaggatctggatctgctttatgacagt
ctggaggtctacaaccccagcgacagcgggcctgaaatggaggataacgagagcgtcctg
agcacgccgaagcctaaactcaagccgttctttgaaggaatgtcacattccagttcacag
acagagattgggagcctgcaaagccagaagagccagaacagagaccatgccattcctact
ggcgaattccttgcatgcgagaagagcaaacctgccccctccaggtatccggaagaggtt
attgtggaatccacaccaggggaggctgaggaggaggatttaggcactgggagtgccagc
acctgggacactagcacagataaactgacttcttctgttgggaagctcagtaaaacagag
tcccagaaccttgtctcacccagcaaagtagaaattaagcagcacagacgcccccgaagc
acttcaatgaaagatcgtcagaactcgaaagcacagattgaccgaacaaacagcgtcgac
agcgagagttcaccagactctaggctcaacacacaggtccctcggaagtcggtgtacgac
cagctgaaccaaatcctgatctgcgacgagcagctgccggagagcatcatcctgatcaat
acgacagactggcaaggccagtatttgtctgagattcttcatgagcaaaatcagccaatt
gtttccacatgttcagcggcggacgtgcaggcagcgtttaacactattgttaccaggatc
cagagattctgtaactgcaattcccaaatgcctcatacaataaaagtggctgtggctgga
gatcacagttatctgagcgctatcctgaggttctttgtggaacagctggcaaacaagact
cccgactggctcaactacatccggttcctcatcatccctattggctgccatccactagcc
aagtacttggcatcatttgatagcaaattcagcaatatctttatggacacagcatggagg
gagatcttcagcaaaacagagccaccaacctcagataacattgacattgcaggccgggta
agccagtacatattgggtgccaacgcttcccatcagtttcccatctcagaggccatgctc
acctataaaaagaagagccctgatgaggattcctgtcagaaattcatcccttttattggg
gtggtaaaggtggggattgtggaaccgaatctctctgcctcagtggattctgatgatgcc
acagtatgcaatgttaatctgctgacatcccctccgacttctgcgggcagcacatatggg
aaagagatgaccagcaccccacccccgtccccttctgtttccagcggactgtccggagct
ggctctccgtgtttagggggagaggtgatgggactgcaggtggactactggacctcacag
gggccagagaagaagaaggacggggagaagcgggacgtgggcatgaaaaatactctgaag
agcaacttccgctccctccaggtcagccggatccccagcagcggagagctgacagcaccc
gccaccatgtccatgactgtggtcaccaaggagaagaacaaaaaggtaatattcctcagt
aagaaacccaaggagaaagagcttgattcaaagagtcaggtgattgatgggatcagcagg
ttaatctgtactgccaaacaccagcacaccatgcttaaagtctccattgatggtgtggaa
tggaatgatgtcaagtttttccagctggctgctcagtggcctactcatgtgaagcacttc
cctgtgggaatattgggatacaccaaaccagtgtaa
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