Polyodon spathula (Mississippi paddlefish): 121315715
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Entry
121315715 CDS
T07273
Name
(RefSeq) sorting nexin-5-like
KO
K17920
sorting nexin-5/6/32
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121315715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315715
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121315715
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121315715
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121315715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BLYB
Motif
Other DBs
NCBI-GeneID:
121315715
NCBI-ProteinID:
XP_041105994
LinkDB
All DBs
Position
5:complement(21151944..21166792)
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AA seq
400 aa
AA seq
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MASTPEESDRNSKLRSVSVDLNNDTSLMIDIPDALCERDKVKFTVHTKTTLDAFQKPEFS
VPRQHEDFIWLHDTLDETEEYAGLIIPPSPPKPDFESPREKMHKLGEGEATMTKEEYTKM
KQELEAEYLAVFKKTVQVHEVFLQRLSSHPVLSKDRNFHIFLEYDQDLSVRRKNAKEMFG
GFFKNMVKTADEVIISGIKEVDDFFDQEKTFLLDYYNKIRDATTKAEKMTRAHKNVADDY
IHFSATLDSLSADESTALKMYLLKLAELFEKLRKVEGRVASDEDLKLTELLRYYMRDIQA
AKDLLYRRARGLADYESSNKALDKARLKSKEVQQAEEHQQLCCQKFEKLSESGKRELISF
KGRRVVAFRKNLIEMAELEIKHAKSSVTLLQSCIDMLKTN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactcccgaagagagtgatcgcaacagcaagctcagatccgtttctgtggac
ctgaacaacgatacctctctcatgatcgacattcctgatgcactctgtgaaagagataaa
gtaaagtttacagtccacaccaagactacactagatgcctttcagaagccagagttttca
gtacccagacaacatgaagatttcatctggttacatgacaccctcgatgagactgaagag
tatgcaggacttattattcctccatcccctccgaagcctgactttgaaagtccgagggaa
aagatgcacaagctgggagaaggggaggccaccatgacgaaagaggagtataccaaaatg
aaacaagagcttgaagccgagtaccttgctgtgtttaaaaagacagtgcaagtccatgaa
gttttcctgcagaggctttcttcacacccagtcctcagtaaagatcgcaacttccacatt
ttcttggagtatgaccaggatttgagtgtgaggaggaagaatgccaaggaaatgtttggc
ggtttctttaaaaacatggtgaaaactgcagatgaagtgattatttctggtataaaggaa
gtggacgatttttttgaccaagagaagacattcctccttgattattacaacaaaatccga
gatgcaactacgaaagctgaaaaaatgacaagagcgcacaaaaatgttgcagatgactac
attcacttctccgccactttggacagcctttcggcagacgaatccactgcacttaaaatg
tacctgctgaagcttgcagagctatttgaaaaactcaggaaagtggaagggagagtggct
tctgatgaagatttgaagttgaccgagttactaagatactacatgagagacattcaagca
gcgaaggacctgttgtataggcgagcgaggggccttgcagactacgagagctccaataag
gccctggataaggcccgattgaagagcaaagaggtgcaacaagcagaagagcaccagcaa
ctctgctgtcagaaatttgagaagctctcagagtctggaaagagagaactgatcagtttt
aaagggaggagagtggtggcttttcgcaagaatctcattgaaatggctgaactagaaata
aagcatgcaaaaagcagcgtgactctcctgcagagctgtattgacatgttaaagaccaat
taa
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