Polyodon spathula (Mississippi paddlefish): 121315722
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Entry
121315722 CDS
T07273
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121315722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121315722
03036 Chromosome and associated proteins [BR:
pspa03036
]
121315722
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121315722
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
121315722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
121315722
NCBI-ProteinID:
XP_041106003
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All DBs
Position
5:21295212..21326134
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AA seq
1209 aa
AA seq
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MSEQVNALCEQLIKAVNVMMDTESSQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQPP
IIRHFGLQILEHCVKFRWNNMPQREKVNLKNNVMGLISNGIRPILEEESHIKDVLSRIVV
EMIKREWPQHWPDMLKELESLTKQGEAQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQT
LTQNMENIFNFLLNILQQNVNKYRKMKTDPTQEIKAKAHCRVGVAALNTLAGYIDWVALV
HITNDNCRLLEMLCLLLSEAELQLEAAECLLIAVSRKGKLEDRKPLMILFGDVAMHYILS
AAQPADGAGLTERHYVFLKRLCQVLCALGGQLCALLASDVDVETPANLGKYLEAFLAFTT
HPSQFLRSSTQVTWGSLFRHEVLSKDPMTMAITSKYVRASMTNLVKVGFPSKTDSPSCEY
SRVDFDSDEDFNAFFNSFRAQQGEVVRNACKLIPLETFQMAGEWLQYQLNTPIDIGPTTS
KTAEGLCSIFSPSYVQWDAMTFFTESVVSQLIKFVDKEKLPVDQGMELLQAVLNYETRDP
LILSCVLTNVSTLFPFVNFRPEFLPQVLSKLFLSVTFEVIEESKAPRTRAVKNVRRHACS
SIIKMCRDYPQLILPCFEMLYSHVKRLFSNELLLTQMEKCALMEALVLISNQFKNYEKQK
AFLEELMAPVSSRWLSKEMTQVLSDPTLFLAFVGADVKVSGIIDDPTGINRSRISFCVYT
ILGVVKRARWPSDLEEAKAGGFVDGYAPNGNPIYRNPCAEQVRKLLHNLLALIRTHNNLF
LPENLAKLSETFGKAFDMMEVEKNAILGLPQPLLDLYDSPVYKTVLERMQGFFCTLYDNC
FHILGNAGQSLQQDFYTIDGLAGQLITSAFVNLANVPDYRLRPMLRVFVKQLVLSCPPEY
YNTLMCPILGPLFAYLLQRLTQKWQVIHQRSSLCNSEDEPPEENPMSQEMLDEQLVRLLT
REVMDLLSVCCIVKRGSEAAGAKEGELEEEDMMATDASQAPQPATTTLDELTELGKCLLK
NEDICTTFLTTAYSSLSWKDTITCQRMTTQVCWPLLKQVMSGSLLADAVTWFYGAVLRGL
QMHGQHEGCNTALIQLAFFIYETLRPRFPELRTVMEQIPQIQMDSLDQFDLKVLNPGQQK
TADKKRKDIFKRLISGTVGKPLGQQFKKEVHIKNLPSLFKKNKSEPTLDTLDGNSAGLAT
LFSPNPDDI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaggtgaacgcgctttgtgaacagctgataaaggcagtgaatgtaatgatg
gatacggaatcaagtcaacgataccgactggaggccctaaagttttgtgaagaattcaag
gagaagtgtccgatttgtgtcccctgtggacttaaactagcagagaagacccagccacca
attatcagacattttggtcttcagatactggaacactgtgtcaaattccgctggaacaat
atgccacagcgggaaaaagtaaatttgaaaaacaatgtgatgggattaatatcaaatggc
attcgtcccattctggaagaggagagtcatatcaaggatgttctgtcccgaattgtggtg
gagatgatcaagagagagtggccgcagcactggcctgacatgctgaaggaactcgagtct
ctcacaaagcagggggaagcgcagacggagctggtgatgttcattctgctgcggctggca
gaggatgtagtgaccttccagaccctccccacccaacgccggcgcgatatccagcagacc
ctcacccagaacatggagaacatcttcaacttcctgcttaacattctgcagcagaacgtc
aacaagtaccgcaaaatgaaaacagacccaacacaggaaattaaggccaaggctcactgc
cgtgttggggtagctgctctcaataccctggcaggctacattgactgggtggccctggtt
cacatcacaaacgataactgccggctgctggagatgctatgtctcctgctgagtgaagct
gagctacagctggaagcagcagagtgcctgctcattgctgtcagcagaaagggaaagctg
gaagaccggaagcctctaatgatcttgtttggggatgtagcaatgcactatattctctct
gctgcacagcctgcggatggagcaggactcacagagagacactacgttttcctaaaacgg
ctgtgtcaggttttgtgtgcattgggcggtcagctgtgtgcactgctggcatctgatgtt
gatgttgaaaccccagccaacttgggcaaatacttggaagccttccttgcgtttaccact
cacccaagccagtttttaagatcttcaacccaggtcacttggggctcgttatttagacac
gaggttctgtctaaagatcccatgacaatggcaataacttcaaagtacgtgagagcctcc
atgaccaaccttgttaaggtcggattcccatctaaaacagatagcccaagctgtgaatat
tctcgtgtggactttgacagcgatgaagatttcaacgccttctttaactcattccgagcc
cagcaaggtgaggttgtccgtaacgcctgcaaactgatccctctggagaccttccaaatg
gccggggaatggctgcagtaccagctgaacacgcccattgacatcggcccaaccacatcg
aagaccgcagaaggcctgtgctctatcttctctccgtcgtatgtacagtgggatgccatg
actttcttcacggagagtgttgtcagccagctgatcaagtttgtggacaaagagaaactc
ccggtggatcagggtatggagctgctgcaggctgtcctgaattacgagaccagagacccg
ctcatactctcctgcgtgctgaccaatgtgtcaaccctcttcccgtttgtcaacttccgg
cctgaattcctgccccaggtcctctccaagctatttttatcagttacatttgaagtgatt
gaggagagcaaggctcccaggacccgtgcagtgaagaatgtgagaagacatgcttgctcc
tccattatcaagatgtgcagagactacccacaactcatactgccctgcttcgagatgctg
tactcccatgtgaagcggctgttctccaatgagctgctgctcactcagatggagaagtgt
gctctgatggaggctctcgttctcatcagcaaccagttcaagaactacgagaaacagaag
gctttcctggaggagctgatggccccggtctccagtcgctggctctcaaaagaaatgaca
caagtgctgtcggaccccaccttgttccttgcctttgtgggtgctgatgtgaaagtgagt
gggatcatcgacgatcctactggcatcaacaggtccaggataagcttttgtgtgtacacc
attctgggcgtagtgaaacgggcccgctggcccagtgatctggaggaagccaaagctgga
ggatttgtggacgggtacgcccccaacggcaatccgatctaccgcaacccctgcgccgag
caggtccgaaaacttctccacaacttgctcgctctcataaggactcacaacaacctgttc
ctgcctgagaacttggccaaattgagtgagacgtttggcaaagcctttgacatgatggaa
gtggagaagaatgctattttgggtctccctcagcccttgttggacctctacgactcccct
gtatataaaacagtgctggaacgaatgcagggtttcttctgtacgctctatgataactgc
ttccacattttgggaaatgcaggccagtcgttgcagcaggatttctacaccatcgatggc
ttggctggccagttaatcacctctgctttcgtcaacctggccaatgttcctgactaccgg
ctccgccccatgcttcgtgtgttcgtgaagcagctggttctctcctgccctccggagtac
tacaacaccctcatgtgccctatcctggggcctctctttgcctatctgttacagaggctt
actcagaagtggcaggtcatccaccagagaagtagcctttgcaactctgaggacgaaccc
cctgaagagaaccccatgtctcaggagatgctggacgagcagctggtcaggctgctgacc
cgggaagtcatggacctcctcagtgtatgctgtattgtgaagaggggatctgaagcagct
ggtgctaaagaaggtgaattggaagaggaagatatgatggctacagatgcttcccaggct
cctcagccagcgactaccacgttggatgaattgactgagctgggaaagtgcctgctgaag
aacgaggacatttgtacaacatttttgacaactgcgtacagctccctctcctggaaggat
accattacctgccagaggatgacaacgcaggtctgctggcctctgctgaaacaggtgatg
tctgggagtctgttggcggatgcagttacctggttttacggcgccgtgttgagggggttg
cagatgcatgggcagcacgagggctgcaacactgcgctcatccagctggctttcttcatt
tatgagacactgagaccccgcttccctgagctgaggactgtgatggaacagatcccccag
atccagatggacagtctggaccagtttgacttgaaagtgctgaaccctggacagcagaaa
acagcagacaaaaagaggaaggacatctttaaaaggcttatttctggcacagttgggaaa
ccccttggacagcagtttaaaaaggaagttcacatcaaaaacctaccatccctattcaag
aaaaacaaatctgagccgacactggatacccttgatggcaatagtgccggcttggcaaca
ctcttttcacctaaccctgatgatatttga
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integrated database retrieval system
