Polyodon spathula (Mississippi paddlefish): 121315742
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Entry
121315742 CDS
T07273
Name
(RefSeq) ras-related protein Rab-23-like
KO
K06234
Ras-related protein Rab-23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315742
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121315742
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121315742
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab23
121315742
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
ATP_bind_1
Gtr1_RagA
G-alpha
HGTP_anticodon2
YwhD
MMR_HSR1_Xtn
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
121315742
NCBI-ProteinID:
XP_041106046
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Position
5:24393212..24416404
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AA seq
236 aa
AA seq
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MLEEDMEVAIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNNEDVRL
MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRDSFEAIPSWREKVEAEVGDIPTVLVQ
NKIDLLDDSVIKNEEAEGLAKKLKLRFYRASVKEDLNVNEVFKYLADKYLLRLKQQTAEE
PELVCTTSNKIGVFNTAGGSHSGQNSSNHNGEVISLQPNKQRTKKNKSPFSSCSIP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggaggatatggaggtggccatcaaggtggtggttgtaggaaatggcgctgtt
ggaaaatccagtatgatacaacgctattgcaagggcattttcacaaaagattacaagaag
accattggtgtggattttcttgaaaggcaaattcaagttaacaatgaagacgtcaggttg
atgctctgggacactgcagggcaggaggagtttgatgcaataacaaaggcctattataga
ggtgcgcaagcctgtgttctagtgttctctaccactgacagggattcctttgaagcgatc
cccagctggagagaaaaggtggaagctgaagtgggagacatccccacagtgctagtgcag
aataaaattgatttgctggatgactccgtaataaaaaatgaggaagcagagggcttagca
aagaagctaaaattaagattttatcgtgcttctgtgaaagaggacctgaatgtaaatgaa
gtgtttaagtatctagctgataaataccttctgagactcaagcaacaaaccgcagaggag
ccagaactagtttgtacaaccagcaataaaattggagtttttaatacagctggtggaagt
cactctggtcagaattctagcaatcataatggtgaagtcatcagtcttcagccaaataaa
cagaggaccaagaaaaacaaaagcccattcagcagttgcagcattccctag
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