Polyodon spathula (Mississippi paddlefish): 121315779
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Entry
121315779 CDS
T07273
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121315779
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121315779
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
121315779
NCBI-ProteinID:
XP_041106106
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Position
5:complement(27137341..27184301)
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AA seq
555 aa
AA seq
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MSLVEVYEEGEYERAAKRLKTVEVEVEEGEELEEGEDSDSASPGLLLGDDGDKPVVGGAE
KRAQWSSSQYGSRRDNGNETHRIPPSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMP
FKRQALVEFEGVESADKCVACGANEAVYIAGQQAFLNYSTSKKITRPTHSDNPNSGNNVL
LLSIQNPLYPITTDVLYTVCNPTGNVLRIVIFKRNGIQAMVEFESVQSAQKAKAALNGAD
IYVGCCTLKIEYARPTRLNVIRNDSDSWDYTKPYLVRRDRGKGRQRQAILGEHPSSYGDS
GYGSHCPLLPLSSNNRYKMGSHDIPEVVTYPLPQTSSYMGHGASSSSSVAMVSGLHAKRM
NCTRIFNLICLYGNIEKVKFMKSVPGTALVEMGDEYAVDRAITHLNSIKVFGKRLNVCVS
KQHAVIPSQVFELEDGTSSYKDFAMTRNNRFTSAGQASKNIIQPPSCVLHFYNVPPCVTE
EELQQLCATHDVPGFIKYKVFDAKPSSKTISGLLEFETKTHAVEVLTVLNHYQIRIPNGS
NPYTLKLCFSTSSHL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtagaggtatacgaagaaggggagtatgagcgagctgccaagcgactgaag
actgtagaggtagaggtggaggagggggaggaattagaagagggagaggattcggattca
gcatctcctggcttgctgcttggtgacgatggtgataaacccgtggtaggtggagcagaa
aaaagggcccagtggtcttcatcacaatatggatcaagaagggacaatgggaacgaaacc
caccggattcccccctccccggtggtccatgtgcgggggttgtgtgagtccgtcgtggag
gcagacctggttgaagccctggagaagttcgggacgatatgttacgtgatgatgatgcct
tttaagaggcaggctctggtggagtttgagggggttgaaagtgctgacaagtgtgtggcg
tgcggagccaatgaggctgtctacatagctggacagcaagccttcttgaattattctacc
agtaaaaagatcacccggccgacacactcagacaaccccaacagcggcaataatgtcttg
ctgttgtccattcagaatcctctttaccccataacaacggatgttttatacactgtctgc
aacccgactggaaacgtcctccgtattgtaatattcaagaggaatggcatacaggccatg
gtggaattcgaatctgttcaaagtgctcaaaaagccaaagctgccctcaacggagctgat
atctatgttgggtgctgcacgttgaaaattgaatacgcaaggccaacccgtcttaacgtc
ataagaaatgacagtgatagttgggactacactaaaccatatctggttagacgagatagg
gggaagggaaggcagcggcaagccatcctaggagagcacccatcttcctatggtgacagt
gggtatggttctcactgccccctactgcccttgtcgagtaataatcgatataaaatgggc
tctcatgatatcccggaggtggttacttacccactcccccaaacctcctcctacatgggc
cacggagcatcctcctccagctctgttgccatggtgagcggtctgcatgccaagagaatg
aactgcaccaggatcttcaaccttatttgtttgtatgggaacattgagaaggtcaagttt
atgaaaagtgtgcccggtacagcactggtggaaatgggcgacgagtatgccgtggaccga
gccatcacgcatctcaatagcatcaaggtgtttggaaagagactcaatgtctgtgtgtca
aagcagcatgcagttataccaagccaggtgtttgagctggaggacggcacaagcagttac
aaggactttgccatgaccaggaacaatcgatttaccagcgccggtcaagcttccaagaac
atcatccagcccccctcctgcgtcctgcacttctacaacgtgcccccatgtgtcacagag
gaggagctgcagcagttgtgtgcaacacatgatgtacctgggtttataaagtacaaggtg
tttgatgcaaaaccttcttccaaaacgatatcagggttgttagaatttgaaaccaagacg
catgctgtggaggtcctcacggtactgaatcattaccagatcaggataccaaatggctcc
aatccatacacgttgaaactctgtttctctacatcttctcatctataa
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