Polyodon spathula (Mississippi paddlefish): 121315804
Help
Entry
121315804 CDS
T07273
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121315804
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121315804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
121315804
NCBI-ProteinID:
XP_041106170
LinkDB
All DBs
Position
5:28788546..28825755
Genome browser
AA seq
1375 aa
AA seq
DB search
METQLQIIFEEVVKTEIIEEAFAGLFMDTPEDERTKLISCLGAFRQYWSTLPQESHDQCV
QWIVRFIHGQHSPKRISFLYDCLAMAVETGLLPPRMVCEALINSDSLEWERTHLWALTFR
LIRKIIGGVDYKGVRDLLKALLEKIQSIPNTVSSSVVQQLLAAREVVEYILDRNACLLPA
YFAITEIRKLYPEGKLSHWLLGNLISDFVDSFRATARINSICGRCSLLPVVNNSGAICNS
WKLDPATLRFPLRGLLPYDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHK
QRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL
SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDI
NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMTDYKI
ALLCNAYSTNSECFTLPMGVLVETIYGNGNMRIPLPGTNCMASGSISPLPMSLLDSLTVH
AKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFK
SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLIT
ALGNSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD
ILQTIMSFTPHNWASHTLSCFPAPLQAFFRQNNVPQESRFNLKKNVEEEYRKWKSMTIEN
DIITHFSMQGSPPLFLCLLWKMLLETDHINQTGYRVLKRIGARALVAHVRTFADFLVYEF
STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPS
DFRNRVSDFVKENSPEHWMQNDWHTKHMNYHKKYPEKLYFEGLAEQVSPPVQIQPHHLPI
YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEK
HLRDRTNLKRKLVHAIISSLKENRTQGWCLSETYLKCAMNAREDNPWVPDDTYYCKLIGR
LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVVLKSQ
PLVPRENITAWMNAIGLVITALPEPYWIVLHDCVVNVVNSPTLTSETQWVGYLFQLFDFT
ACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSDVLKPFVKTEFQLLYVYHLVGP
FLQRFQQERTRCMLEIGVAFYEMLQNVDHYNKHLYYVDPICDFLYHVKYMFTGDGIKEQV
EKMICNLRPAVKLRLRFITHISKMEPAAVSQPASVASPAPQPHPGTVNVPLTVSQ
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagctgcagatcatatttgaggaggtggttaaaacggagatcatagaggaa
gcctttgctggcttgttcatggatacacctgaagatgagaggacaaagctgatcagttgt
cttggagcatttcgacagtactggagcactcttcctcaggaatcccacgaccagtgcgtg
cagtggatagttcgattcattcatggccagcatagtccgaaaagaatatctttcctttac
gactgcctggcaatggctgtggaaacaggcctcttgccaccaaggatggtgtgtgaggcg
ctcatcaactctgacagtctggagtgggaaagaacacatctgtgggccttgacatttaga
ctaattcggaaaataattggtggcgttgattataagggggttcgcgatcttttaaaagcc
ttgttggagaagattcagtctattcccaacacagtgagctcttctgttgtgcagcagctt
ctagcagctcgagaagtcgttgagtatatcctggatagaaatgcctgtcttttgccagcc
tattttgctattacagagatcagaaagctctatcctgaaggaaaactgtcacactggttg
ctgggaaaccttatatcagattttgttgacagctttagagcaactgcaagaattaactcc
atttgcgggagatgtagtctgttacctgtggtaaacaactctggtgcaatctgtaattca
tggaaattagatccagctactcttcgtttccctctgagagggcttctgccttatgataag
gatctctttgagccacaaacgggtttgttaagatatgtgctggaacagccatattcaaga
gatatggtctgcaacatgctaggtctcaacaagcagaccttgaacattgctcagcacaaa
cagcgctgcccagtgcttgaggaccagctggttgacctggtggtgtacgctatggagcgc
tcggaaacagaagagcagtttgatgatggaggaaccagccaactgctctggcaacacctc
tccagccagctcatcttttttgtgctgtttcagtttgccagctttccacacatggtgctg
tccctccatcaaaagttggctggtcgaggtctcattaaaggcagggaccacctgatgtgg
gtgcttctgcagtttatttctggcagcatccagaagaatgcattggcagactttcttcct
gtcatgaaactttttgatcttttatacccagagaaagagtgcattccagtgcctgacatc
aacaagccccagtccacacatgcctttgccatgacttgtatctggattcatctcaatagg
aaggcccagaatgacaactccaaacttcagataccaattcctcactctcttaagcttcac
catgaatttttacagcaaagtctcagaaataagagccttcagatgacagactacaagatt
gctcttctgtgtaatgcgtactccactaactctgagtgcttcacattgcctatgggagtt
ctggtagagaccatctatgggaatggcaacatgaggatccctcttcctgggacaaactgc
atggcatctggatcaatttcccctctgccaatgagcctgctggattcactgacagtgcat
gccaaaatgagccttatacacagtatagccacaagagtcatcaaactggcccatgctaag
tccagcattgccttggctccagcactggtggaaacatacagccggctgttggtttacatg
gaaatcgaatccttggggatcaaaggttttattagtcagcttcttcccaatgtgttcaag
tcccatgcctggggcatactgcacacactgcttgagatgttcagttatcgcatgcaccac
atccagccccactacagggtccagctcctcagccatcttcactctcttgctgctgttcca
cagacaaaccaaaaccagctgcatctttgtgtggagagcacagctctgaggttgatcact
gcccttggaaactcagaggtccagccacagttcacacgtttcctcagtgaccctaaaact
gtgctttcagcagagtctgaggaactcaaccgagctctgattctcacattggctagagca
acacatgtaacagatttctttacaggctctgattctatacaaggcacctggtgtaaggat
atactgcagactatcatgagctttactccccacaactgggcttcccacactctcagctgc
ttcccagctccactgcaggctttcttcagacagaacaacgtccctcaggagagccgcttt
aacctgaagaagaatgtggaggaggaatacaggaagtggaaatcaatgaccattgagaat
gacatcatcacccatttctccatgcaaggctcccctcccctcttcctctgcctgctctgg
aagatgctgcttgagaccgatcacattaaccagactggttacagagtgctgaagaggatt
ggggctcgggctttggtggctcacgtccggacattcgctgacttccttgtgtacgagttc
tccacttcagcagggggccagcagctgaataaatgtattgaaatactcaatgatatggtt
tggaaatacaatatcgtcacattggacagactgattttgtgtttggcaatgagaagccac
gaagggaatgaagcccaggtctgctacttcatcatccagctgctgttactgaagcccagt
gacttcaggaaccgtgtgagcgactttgtgaaggaaaactccccagaacactggatgcaa
aatgactggcatactaaacacatgaactatcacaagaagtaccctgagaaactgtatttc
gaaggcctagcagaacaggtgagcccacctgtgcagatacagccccaccaccttcccatc
tactttggaaacgtctgtcttcgcttcctgcctgtgttcgacatcgtcatccaccggttc
ctggagctccttccagtgtccaagtctttggagacactcttggatcatttgggaggcttg
tacaaatttcacgatcgtcctgtgacatatctctacaacactcttcactactatgagaaa
catcttcgtgatcgaacaaacttaaaacgcaagcttgttcatgccatcatcagctcattg
aaggaaaaccgtacacaaggctggtgcctcagtgagacgtacctaaaatgtgcaatgaat
gcacgcgaggacaacccctgggttcccgatgacacctactactgcaagctcattggccga
ttagtagatacaatggctggaaaatcacccggccctttccctaactgcgactggaggttc
aatgagtttcctaaccctgcagcacatgctctccatgtgacctgtgtggagctcatggct
ttggctgtgccagggaaagatgttggaaatgcacttctcaatgttgtgctaaagagccaa
cctttggtacccagggagaatattactgcatggatgaatgcaattggacttgtaatcact
gccttacctgagccttactggattgttctccacgattgtgttgtgaatgtcgtcaacagc
cctactctgacatcagaaactcagtgggtcgggtacctattccagctgtttgatttcaca
gcctgtcaccagtcatactctgagatgtactgtagctatgtcctagctttggctcatgca
gtgtggcatcattcaagcataggacagctctctctcattccaaaatttttgtcggatgtg
ctgaaaccattcgttaagacagagttccagctgctgtatgtgtaccaccttgtggggcca
tttctacagaggtttcagcaggagaggacaagatgtatgctagagataggtgtggctttt
tatgagatgctccaaaatgttgaccactacaacaaacacttgtactatgtggaccccatc
tgtgattttctttatcatgtgaagtacatgtttacaggagacggcatcaaagaacaagtg
gaaaaaatgatttgcaacctgagaccggcagtgaagcttcgcctccggtttataacccac
atcagcaaaatggagccagctgctgtctctcagccagctagtgttgcatccccggcacca
caaccccatccagggactgtcaatgtgcccctgacagtctcacaatag
DBGET
integrated database retrieval system
