Polyodon spathula (Mississippi paddlefish): 121315817
Help
Entry
121315817 CDS
T07273
Name
(RefSeq) syntaxin-7-like
KO
K08488
syntaxin 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04140
Autophagy - animal
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121315817
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121315817
04140 Autophagy - animal
121315817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315817
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121315817
Membrane trafficking [BR:
pspa04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
121315817
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121315817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Synaptobrevin
ETRAMP
CENP-O
Cep57_CLD_2
DUF5345
Motif
Other DBs
NCBI-GeneID:
121315817
NCBI-ProteinID:
XP_041106213
LinkDB
All DBs
Position
5:29911000..29928993
Genome browser
AA seq
256 aa
AA seq
DB search
MSYQSGLDGDANRFAQTIGSNIQKITQHTDEIQSLVNQLGTPQDNTELRQQLLQKQQQAN
QLAKETDRYMKEFGLLPLTAEQRQRKIQKDRLVGDFSSALAAFQKIQRQAAQKEKEFVAR
VRASSRVSGGLPDGGLLSYESENQPQAQVQDDAIKKEDLMLIKERETSIRQLESDITDIN
EIFKDLGMMIHEQGDTIDSIEANVENAEIRVQSASQQLSRAAEHQCKSRKKICILVVILT
LIAVAIGLIIWGASQI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccagtcagggttagatggtgatgcaaaccgctttgcgcagaccataggttca
aacattcagaagattacgcagcacactgatgaaatccaaagccttgtaaaccagcttgga
acaccacaggacaacacagaacttcggcaacagctcctacagaaacagcagcaagctaat
cagctagccaaagaaacagacaggtatatgaaagagtttggattacttccactgacagca
gaacagcgccaaagaaagatacagaaagatcgtctagttggtgacttttctagtgcattg
gctgctttccaaaagattcaaagacaggctgctcagaaggaaaaggaatttgtagcaaga
gtgcgtgccagctcaagagtgtctggtggtttgccagatggaggcctgctgtcatatgaa
agtgaaaatcagccccaagcacaggtacaagatgatgctattaagaaagaggaccttatg
ctcatcaaagaaagagaaacttccataaggcaactggagtctgatattacagatatcaat
gaaatcttcaaagatttgggaatgatgattcatgagcaaggggacacaattgacagcata
gaagccaatgtagaaaatgctgaaatacgtgtgcagtcagccagccagcagctgtccagg
gctgcagaacatcagtgcaaatcccgcaagaagatctgtattctggttgtgattctcaca
ttaatagctgttgcgattggactaatcatctggggtgcttcgcaaatctaa
DBGET
integrated database retrieval system
