Polyodon spathula (Mississippi paddlefish): 121315866
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Entry
121315866 CDS
T07273
Name
(RefSeq) transcriptional activator Myb-like isoform X1
KO
K09420
transcriptional activator Myb
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315866
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121315866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cmyb_C
Myb_DNA-binding
Myb_DNA-bind_6
LMSTEN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121315866
NCBI-ProteinID:
XP_041106338
LinkDB
All DBs
Position
5:33267580..33280937
Genome browser
AA seq
710 aa
AA seq
DB search
MARRPRHSVYSSDEDEEEIEMYDHDYDGPLPKSGKRHLGKTRWTREEDEKLKKLVEHHGT
EDWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVLKYGPKRWSVIAK
HLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIFQAHKRLGNRWAEIAKLLPGRTDNA
IKNHWNSTMRRKVEQEGYLQLSPKTGLPALAANYNKNNHIMGFAHSSPPTQIPTMNADFQ
YFHIPETHSIPGPVPFPVALHVNILNIPQPAAVAIQRHYSDEDPEKEKRIKELELLLMST
ENELRGQQALPSQVPNYSRWNATVMADNSGSRGDNVTISCLGEQQQRTAPPPPLDHGRHP
EERASPARSMAVNQNNGMSPLPELTDTLQLIDSDPSTWADLSSFELHEGADACKMPSNKC
TELQQKEGSVYESTEHTKSSLNKSVLCQGSPALLRSLSASEFATSPAVSLHKRKEIANHS
DSGEGSTFTLADFSCSTPKRSPVKSLPFSPSQFFSTSTNQVNLEIDNPSLTSTPVCTQKS
MITTPLHQDHVTKPQKENDVFRTSNIHQSVMETFPRTATPFKTALALQEIKYGPLNMLPQ
TPHLDQDLEDVIKQEAGESGIAAGLHEDEQPPLKKIKQEVECPCERIRTFLQWEGENLNT
QLFTQGNSSEDAPELNTWEAVACGKTEDQMLVTEQARKYINPFSTRTLVM
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctaggcggccaaggcacagtgtctacagcagtgatgaggatgaagaagaaattgaa
atgtatgaccatgattatgatggaccactgccaaagtctgggaagcgacatctaggtaaa
actagatggacccgtgaagaagatgaaaaactgaagaaactagttgaacaccatggaact
gaagactggaaagttattgccagtttccttcctaatcgaacagatgtgcagtgccagcac
cgatggcaaaaggtgttgaatcctgagcttatcaaggggccttggactaaagaagaggat
cagcgggtgatcgagcttgtgctgaagtatggtcccaaacgctggtctgtcattgcaaag
cacttaaaggggagaattggcaagcagtgcagagaacggtggcataatcatttgaaccca
gaggtgaagaaaacctcctggacagaagaagaagacagaattatattccaagcacacaaa
agactgggaaatagatgggcagaaattgctaaactccttcctggaaggactgataatgct
atcaagaaccactggaattccacgatgcgacgaaaggttgaacaggaaggttatctccag
ctttctcccaaaacaggcctgcctgcattggctgcaaattacaataagaataaccacata
atgggtttcgcccattcgtccccacccactcagatacccacaatgaatgctgattttcaa
tatttccacatcccagaaacacacagtattcctggtccagttccctttccggtagctctg
catgtgaatatactcaacattccccaacccgctgctgtagcaattcagagacactatagt
gatgaagatcctgagaaagagaaaagaataaaggaattagagttgctacttatgtcgact
gagaatgaactgagagggcagcaagcattaccaagccaggtgccaaactactcaagatgg
aatgccacagtgatggctgacaactcaggatctcgtggtgacaatgttaccatttcctgt
ttgggagaacagcagcaacggactgctccccctcctcccctggaccacggccgtcatcct
gaagagagagcctccccagcacgcagcatggcagtcaaccaaaataatggcatgtcgcct
ctccctgagttaacagatacactccagctaatagattcggatccttccacatgggccgat
ctcagcagttttgaactccatgaaggtgcagatgcttgcaaaatgccaagcaacaaatgc
acagagcttcagcaaaaagagggcagtgtgtacgaaagtactgaacacactaagtcaagc
ttaaacaaaagcgtgctgtgtcagggctctcctgctttgctcaggtcactttctgcctca
gagtttgccacctctcctgcagtcagccttcacaaacggaaagagattgccaaccattcg
gacagtggtgagggtagcaccttcacactagcagacttcagctgctccactcccaagcgt
tccccggtcaaaagcctgcccttctcaccctcgcagtttttcagcacctcaacaaatcaa
gtaaatctagagattgacaatccatcattaacatccactcctgtttgtactcagaaatcc
atgattacaactccactgcaccaggaccacgtaactaaacctcagaaagagaatgatgtt
ttcagaacttcaaatatccatcaatcggtaatggagacatttccaagaactgctactcct
ttcaaaactgcactggctctacaggaaatcaaatatggccctttaaacatgctgccccaa
actccccatctcgatcaagacttggaagatgtcatcaaacaggaagctggtgagtctgga
attgcagcagggttgcatgaagatgagcaacctcccttaaagaaaattaaacaagaggtg
gaatgcccctgtgagagaataagaactttcctccagtgggagggagaaaacctcaacact
cagctcttcacacaaggcaattcttccgaagatgcaccggagttgaacacatgggaagca
gttgcttgtggaaagactgaagaccaaatgcttgtaacagagcaggcccgcaaatatatt
aacccattctcaaccaggactctagtcatgtaa
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