Polyodon spathula (Mississippi paddlefish): 121315872
Help
Entry
121315872 CDS
T07273
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315872
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121315872
Membrane trafficking [BR:
pspa04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
121315872
Other autophagy associated proteins
Micronucleophagy
121315872
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121315872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
HEAT_2
Cnd1
Arm_2
V-ATPase_H_N
ZER1-like_2nd
KAP
Motif
Other DBs
NCBI-GeneID:
121315872
NCBI-ProteinID:
XP_041106355
LinkDB
All DBs
Position
5:33581398..33602154
Genome browser
AA seq
580 aa
AA seq
DB search
MGVEQLCIFCAQLLKDFLALVRGVMSDFAQKIRDCVDAISQCSCLKRKKDVVSKFYKPVL
QQHERQAAQEFLQHLDTGTDKPLLDNDCLHALRTLAVSENPNLQQSAAIYYLHISQQLNA
PLPVEFLEPYNALLQSSDMEVQRITSLALVNLLVEENVNKELVVEMGMLEPILELLESGD
PTVQCNSCACVATLTTSESNREAIASAGGVLPVLVLAKSYDPRVQQNAVGAILNLTRSER
TREVLWREGALPVLTVLLESADSEVQYYSCSALSNFATNPGYHQIMLQVGDRFLLKALLS
LMSSSVQKICCQSCRCLGNLSVNVNTQEVLVAMGCIPQLKALLGSSSEPVSESAVTLLSA
LSEHPHNRDALVNEGFLKILKELLSFRTNPVILSHTAYTIRNLSSSQSVQAVIDSECVDG
LLQTLACTDTTEESLLCVTTCVKELTALESLKSHTAEKLNAELVGRLISLAGQFENTELS
FHAAYIISQLEPKDEVRQSLKPHINEVLGYLLLFLSHQEVRFQHLGILTLCRLNEDAQFS
SAIGLSPLVEQLQRVQQQTEETQALLRMAMHSTNREGQGH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagagcagttgtgtattttttgtgctcagctgttgaaagacttccttgcactt
gtgcgaggggttatgtcagactttgcacagaaaataagggactgtgtggatgctattagc
cagtgttcctgcttgaaaagaaaaaaagacgtggtcagtaaattttacaagcctgttctt
cagcagcatgaaagacaagcagcacaggaatttctgcaacacctggacacaggtactgac
aaaccactgcttgacaatgattgtctacatgccctgaggactttagctgtttctgaaaac
cctaacctacaacagtcagctgccatatactatttacacattagtcaacagttaaatgca
ccattacctgttgagttcttggaaccttacaatgctttgctccagtccagcgatatggag
gtacagaggatcacttcactggcacttgtcaatcttttggtggaggaaaatgtgaacaaa
gagttagtggttgaaatggggatgctggagccgatactggaacttttggagtctggagac
cctactgtccagtgtaactcatgtgcatgtgtggccaccctcacaacttccgaatcaaac
agagaagcaattgcatctgcaggtggagttttgccagtgctggtgcttgcaaagtcctat
gatccgcgggtgcagcagaatgctgtcggcgccattctgaatctcaccagatcagagagg
actagagaggttttgtggagggaaggtgccttgcctgttcttacagttcttctagagtct
gccgactctgaagttcagtattacagctgttctgctctaagcaattttgcaactaatccc
gggtaccaccagattatgcttcaagtaggggaccggttcctgctgaaggcactgctctcc
ttaatgtcttcctctgttcaaaagatatgctgccaatcgtgccgttgcctcggaaactta
tcagttaatgtaaatacccaagaggtgcttgtggctatgggctgcattcctcagctgaag
gctttgctcgggtcctccagtgagcctgtgtcagaatcagcagtcactctcctcagtgcc
ctgtcagaacacccccacaacagggatgccttggtgaatgaaggctttttgaagattctg
aaagagctgcttagtttcagaaccaacccagtaatccttagccacactgcctataccatc
aggaacctgagctccagtcagagtgttcaggctgtaattgacagcgagtgtgtagatggg
ttgctccagactcttgcttgtacggatactacagaggaatccctgctttgtgtcactacc
tgtgtaaaagagcttacagcacttgaatcactgaagtcacacacagctgaaaaattgaat
gctgagctggtaggacgtcttatcagtttggctggccagtttgaaaacacagagttatcg
tttcacgctgcatatattatcagccagcttgaaccaaaagatgaagttcgtcagtcatta
aagcctcacatcaatgaagttttgggatacctgctactatttctgagtcatcaagaagtt
aggttccagcatctaggaatactcaccctctgcaggctcaatgaagatgctcaattttca
tcagctattggactaagccctttagtggagcaacttcagagggtccagcagcaaacagaa
gaaacacaagccctattgaggatggcaatgcactcaacaaatagagaaggacaggggcat
taa
DBGET
integrated database retrieval system
