Polyodon spathula (Mississippi paddlefish): 121315884
Help
Entry
121315884 CDS
T07273
Name
(RefSeq) synaptotagmin-like protein 3
KO
K17598
synaptotagmin-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121315884
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121315884
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121315884
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
121315884
Small GTPases and associated proteins
Rab associated proteins
121315884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
121315884
NCBI-ProteinID:
XP_041106374
LinkDB
All DBs
Position
5:complement(34171712..34203893)
Genome browser
AA seq
621 aa
AA seq
DB search
MAEKIDLHFLKELEREKVLEVLYRDKALRAAEEERIRKLKSELREIHWKGAKSFSQQYAD
KTCARCQKSLGKILNSGAVCKGCSHRICTKCRIIISAREWKCTVCYAYGEVKIKSGDWFF
EERANKFPSCEGNQESVGETLLKSYQRLSNIAIVPPTPPPFFENVSVSNAGELKHSKGFT
KSVENLFISFTTHMKKISKSHNDVTVNQTFLTTDYGQGTKKERKSQSDTAINKEAMLTKA
PCPPIMFKKATANEDEDRVDVGRLAEANPTKTLYTGAVERDSTCSVSSACTEDGNFEKAR
VTGEIEFCIVYNYKRSCLEICIKACKNLAYGDEKKRKCNPYIKTYLLPDKSPQSKLKTTV
KKNTTDPTFSETLRYNIDRSQLETRSLQVSVWHSETLKRKVFLGEVIIPLDSWKFEEDSR
QSYNWYQLDSKPDQYEDCVLVQYNGELCIKVKFVLPSLSSKIQTQHLSMEDLQNKMTVIG
QLNVMIIGAKNLPSLRPDGTLNSFVKVCLILPDKRQLKLKTPVLKKKACPQWNHQLVFSD
VLLGELWDSCLDITVWDHAAFGLTDRFLGGVRLERGILSTDSRDMVEVTSGQPWQNILRR
PNTWNDITLILHPNMEYMMKT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaatcgacttgcatttcctcaaagaacttgaaagagagaaggttctagaa
gtcctgtacagggataaggcactgcgtgcagctgaagaagaacggataagaaagctgaag
tctgagctcagagaaatccactggaagggtgccaagagtttcagccagcagtacgcagat
aagacctgtgcccgatgtcagaaatcccttgggaagatattgaacagcggagctgtgtgc
aaaggatgcagccaccgaatctgtaccaagtgccgtatcattatctctgccagggagtgg
aaatgcactgtatgttatgcttatggggaagtgaaaataaaatctggagactggttcttt
gaagaaagagcaaacaaattcccaagttgtgaaggtaatcaggagtctgttggtgaaaca
ttattaaaatcatatcaaagactaagtaatattgccattgtccctcccactccacctcct
ttttttgagaatgtgtctgtaagcaatgctggggagttaaaacattcaaaaggtttcact
aaatcagtagaaaacctgttcatttcattcacaactcacatgaaaaaaatctccaagtcc
cataatgatgtgacagtaaaccaaactttcctgacaacagattacggacagggaaccaaa
aaggagagaaagagtcaatcagacacggccataaacaaagaagccatgctaacaaaggca
ccctgtcctcccatcatgttcaaaaaagctacagctaatgaagatgaagacagagtagat
gttggccgtttggctgaagccaaccctacaaagacactgtacacgggagcagtggaaagg
gacagtacttgcagtgtcagcagtgcatgtactgaagatggcaattttgagaaagccaga
gtcactggagaaattgaattctgcattgtgtacaactacaagagatcctgcttagaaatc
tgtattaaagcttgtaaaaacctagcctacggggatgaaaagaagagaaagtgcaaccca
tacatcaaaacctacctgctccctgataagtcccctcagagtaaactgaaaacaacagtt
aaaaagaacacaacagaccccactttcagtgaaacattaaggtacaacatcgaccggtct
cagcttgaaacccgatccctgcaggtgtctgtgtggcactcggagactctcaaacgcaag
gtcttcctcggggaggtcatcattcctctggattcctggaagtttgaggaggactccaga
cagtcatacaactggtatcaactggattctaagcctgatcagtatgaagattgtgtactg
gtacagtacaatggggagctctgtatcaaggtgaaatttgtcttaccatcgctaagctcc
aaaatccagactcaacacctctcaatggaagatttgcagaacaagatgactgtcattggt
caactcaatgttatgatcattggagccaaaaacctgccatctttaaggcctgatggtact
ttaaactcatttgtcaaagtgtgcctaatccttccagataaaaggcagttgaaactgaag
actccagtgcttaaaaagaaagcttgcccacagtggaatcaccagcttgtgttcagcgat
gtgcttctgggtgaattgtgggattcctgtcttgatatcactgtctgggaccatgctgcc
tttggcctcactgaccgtttcctggggggagtcagactagagagggggatactgtcgaca
gactcccgtgacatggtggaagtcacttctggacaaccttggcaaaacattctgaggaga
ccaaacacttggaatgacatcacacttatacttcacccaaatatggagtacatgatgaaa
acctaa
DBGET
integrated database retrieval system
