Polyodon spathula (Mississippi paddlefish): 121315933
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Entry
121315933 CDS
T07273
Name
(RefSeq) fermitin family homolog 1-like isoform X1
KO
K17082
kindlin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121315933
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121315933
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121315933
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121315933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kindlin_2_N
FERM_M
PH
PH_17
MLKL_N
Motif
Other DBs
NCBI-GeneID:
121315933
NCBI-ProteinID:
XP_041106483
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All DBs
Position
5:38864973..38890150
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AA seq
698 aa
AA seq
DB search
MTTAAEYGATSWELCVQVEHQYEGEPKEFNIRVTGDLHIGGLMLKLVEQIQIPQDWSNYA
LWWEQKNCWLLKTHWTLDKYGVQADANLLYTPQHKALRLQLPNMKIVRLKVSFSAKVFKA
VSEICKTLIHPSFSFQHSMQKDRCLQQMDKDIRRSEELSLLKPLDEPQKKKKKEKSNNLI
IEDILNLDNTAVISGAAASPGLYSKTMTPIYDPVNGTPASSTIMWFSDSPLTEQNCNVLA
VSQPNCPPEKLAKLYQPLSLVDKAAINAGWLDSSRSLMEQGFQEEDKLLLRFKYFSFFDL
NPKYDAVRINQLYEQARWAILLEEIECTEEEMFMFASLQYHISKMSKSSEPQSSSNEPDT
DEVEAALANLEVALDGAHSDRMLEDITDIPKLADYLKLFRPKKLTLRAYKEYWFVFKDTS
ISYYKNMECARADPIEQLHLRGCEVVPDVNVSSKKFGIKLLIPVADGMNEIYLRCENENQ
YAKWMAACMLASKGKTMAYSSYRTEVRNIQSFLKMKDLNSAQAQAAPNLEAMEMNSDCFV
SPRYVKKYKNKQLTARILEAHQNVSQMSLVEAKMRFIQAWQSLPEFGIKYYIVRFRGCKK
DELLGISYNRLIRIDMSTCLPIITWRFSNMRQWNVNWEIRQVAIEFDQNVSIAFACLSCD
CKVVHEYIGGYIFLSTRSKDQNETLDEELFHKLTGGQD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgactacagctgcagaatatggagccacttcttgggagctctgtgttcaggtggagcat
cagtatgaaggcgaaccaaaggagtttaatatcagagtcacaggagacctccacattggg
gggttgatgctcaaattagtcgaacaaatccagattcctcaagactggtcaaactacgct
ctttggtgggaacagaagaactgctggctgttgaaaacccactggacactggacaaatat
ggagtgcaggctgatgctaatcttctctacacacctcagcacaaagctctgcggctgcag
ctgccaaacatgaagattgtaagactgaaggtcagcttctctgctaaggttttcaaggca
gtcagcgaaatctgcaaaactctaatacacccaagtttctcatttcagcattcaatgcaa
aaggacagatgtctccagcagatggacaaagatatcagaaggtcagaggagctctcctta
ctgaagccactagatgaaccacagaaaaagaagaaaaaagaaaaaagtaacaatctaatc
attgaagacattttaaatttggacaacactgcagtcatctcgggagctgcagcaagccct
gggctgtacagtaaaaccatgacacctatatacgatccagtcaacggaactccagcgtcg
tctaccattatgtggttcagtgacagtccactaacagaacagaactgtaatgtcctggct
gttagccagccaaactgcccacctgaaaaactagcaaagctgtaccagccactgtcgtta
gttgacaaagcggcaataaatgcaggatggttagattcatcccgttccctcatggaacaa
ggctttcaggaggaggataaacttttgttgcgcttcaagtacttcagtttctttgacttg
aacccaaaatatgatgctgtcagaataaaccagctctatgaacaggcacggtgggcaata
cttttggaagaaattgaatgcactgaagaagaaatgttcatgtttgcctcactgcagtac
catataagcaagatgtccaagtcttctgaaccgcaaagttcttcaaatgagcctgacaca
gatgaagtagaagctgccctagctaatctagaagtggcacttgatggcgcacattcagac
agaatgctggaggacatcactgatattccaaagcttgctgattatctgaagcttttcagg
cccaaaaagctgaccctgcgagcgtataaggagtactggtttgtttttaaagacacctcc
atatcatactacaagaatatggaatgtgctcgagcagaccccattgaacagctgcaccta
agaggttgtgaagttgtacctgatgttaatgtctcaagtaagaaatttggaatcaagctc
ttaattcctgtagccgatggcatgaatgaaatctacctgcgatgtgaaaatgagaatcag
tacgccaaatggatggctgcatgcatgctggcatccaaagggaaaacgatggcctacagc
tcctaccgaactgaagtccgcaacattcagtctttcctgaaaatgaaggacctaaactca
gctcaagcacaagctgctccaaatctagaagccatggagatgaactcagattgttttgtg
tctcccagatatgtgaaaaagtacaaaaataaacagctaacagcacgtatcctggaagca
catcagaatgtctcccaaatgtctcttgtggaagccaagatgcgttttatacaagcatgg
cagtcgctacccgagtttggcatcaaatactatattgtaaggtttcgaggatgcaagaaa
gatgagctgttggggatttcctacaacagattaataaggatagatatgagtacttgtctt
ccaataataacctggcggttctcgaacatgaggcaatggaatgtaaactgggagattcgt
caggttgcaattgagtttgatcagaatgtgtcaatcgcatttgcctgcctgagttgcgac
tgtaaggtcgtccatgaatacattggagggtacattttcctgtcaacccgatccaaggat
caaaatgaaactttagatgaagaacttttccataagcttacaggaggacaggactaa
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