Polyodon spathula (Mississippi paddlefish): 121315940
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Entry
121315940 CDS
T07273
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121315940
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
121315940
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GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
121315940
NCBI-ProteinID:
XP_041106491
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Position
5:39052462..39086792
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AA seq
666 aa
AA seq
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MACTRVTFQVRGTTSPGEFLAVCGNCADLGSWFPHKAVLLEQDADDCTLWKKTVTVPRGE
PSTYRYFKGFFLKSKNAGGPCPVIVNKWETHQHPRALNPSEPELFVDDGEFGFCNDIECV
DSGWLTFQTEVRLRLHYSAKPPVSISKKKFKKSRFRVKLTLEGCEEEDDDDDDNNTEKLS
PSFWHKMTTTLGISLISNDEYKSRHSQPDFGYALEPNLWTEYSIHTMDPDNLELTFEFFE
EDLSEAVVQGDAMPGHVGTACLLSSTFVDTGKNTGFVTLPIMGRNSRQTIGKVRVDYIVI
RPIEGHICDMSTSFTKYWKKRTALDVGHRGAGSSSHMERYAKVRENTIASFKSAANHGAA
FVEFDVHLSKDSVPIVYHDLTCCISMKKKHNNDSLELFEIPVKDLTFDQLQLLKLAHATA
VNGSDPADEEEYIAEHQPFPSLLQILQAVPEHVGFNIEIKWLCQLKDGTWERNLSTYFDM
NLFLDIILKCVLQNAAKRRIVFSSFDADICSMVRQKQNKYPILFLTQGFSKVYPELVDLR
SRTTSIAMSFAQSEDILGINVHTEDLLRNLDYIKEVKSKGLVLFCWGDDNNDHENRRKLK
EYGVDGLVYDRICDAQPEQPNIFKVEELEGLKNSIPAETLKSCATSSICLTCSSVCSCKD
SFLHRF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcactcgggtcacttttcaagtgaggggaacaacatctccaggtgaattttta
gcagtttgtggcaactgtgcagatcttggaagctggtttccacataaagctgtgctccta
gagcaagatgcagatgattgcacactgtggaaaaaaacagtcactgttccaagaggggaa
ccttcaacctatcgttattttaaaggcttttttctgaagtctaagaatgcaggtggtcca
tgtccagtcatagtcaataagtgggagacccatcaacatccacgagcattgaatccttca
gaaccagagctgtttgttgatgatggcgagtttggtttttgtaatgacattgagtgtgta
gattcaggatggttaacatttcagactgaagttcgcctgcgacttcattactctgcaaag
cctccggtatcaatttcaaaaaagaagtttaagaaatccaggtttagggtgaagctgaca
ttggaaggttgtgaagaagaagacgacgatgatgatgacaataatacagagaaactttct
ccttccttctggcataaaatgacaaccactctgggaatctctttaatcagcaatgatgag
tataagtcccgacactcccagccggattttggttatgctttagaacccaacctttggact
gagtacagcatccataccatggatccagataacttggaattgacatttgagttttttgag
gaagatttgagtgaggcagtagttcagggagatgcaatgccgggccatgtgggaactgct
tgcttgttatcttcgacttttgtagacactggtaaaaacactggatttgtcacacttccc
atcatgggcaggaactccagacagacaattggaaaagtgagagttgactacattgtaata
agaccaattgaaggccatatatgcgatatgagtacttcatttaccaagtactggaaaaaa
cgaactgctttggatgtgggtcataggggagcaggaagctcctcacatatggagagatat
gctaaagtcagggagaatacaattgcttccttcaaaagtgccgcaaatcatggtgctgct
tttgtggagtttgatgtgcacctttccaaagacagtgttccaattgtgtaccatgacctt
acctgttgcatatccatgaaaaagaaacataacaacgattctttagaattatttgaaatc
cctgtgaaggatcttacatttgaccagctccagttattaaagttggctcatgcgactgca
gtgaatgggagtgatcctgcagatgaggaagagtatattgcagagcaccagccttttcct
tcacttctacaaatcttgcaagctgtgccagaacatgtgggtttcaacattgaaattaaa
tggctctgtcaactaaaagatggtacctgggaacgaaacctgtcaacctactttgacatg
aacctgtttcttgacatcatcctcaagtgtgtgcttcaaaatgcagcaaagagaagaatt
gtgttttcctcattcgatgcagatatttgctcaatggttcgtcaaaagcagaataaatac
cctatcctattcctgacccaaggcttctctaaagtctacccagaactagtagatctcagg
tctcgaaccacctcaattgcaatgagttttgcacagagtgaagacattttgggaataaat
gtgcacacagaggatttgctgagaaaccttgactatataaaggaggtcaaatcaaaaggt
ttagtccttttctgctggggcgatgataacaatgaccatgaaaacaggagaaagctcaaa
gaatatggagtcgatggattggtatatgacaggatctgcgatgctcagcctgagcagcct
aacatcttcaaagtggaagagctagaaggtcttaagaatagcataccagcagaaaccctg
aaaagctgtgccacttccagtatttgtctgacgtgttcttctgtgtgctcctgcaaggac
tcgtttctgcatcgtttttaa
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