Polyodon spathula (Mississippi paddlefish): 121315956
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Entry
121315956 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2-like
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121315956
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121315956
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121315956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121315956
NCBI-ProteinID:
XP_041106527
LinkDB
All DBs
Position
1:24919590..24936596
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AA seq
701 aa
AA seq
DB search
MGQEAGKPAWPKPAGGYQTITGKRYGRRHAYISFRPTLAKEENASKENSVECGGMEMNSV
HKENALSSTEAISSTLHTIFPAANNSVVPEINRTTIFKEGSGRKNAVSKKAADAAGCSSQ
VLEDEQTGSNNAENGSKPKKNSEACALPTLEDNETCPRRPGGLGFVNIDSYEPDSNGGKE
DDLSVDSSIGMRPGLQKQLDNMICELEKEFDYLSGLHSYLYTKSCEEVELVPKNGCCGTD
LEESNESNRMFKGRLCRLTEDSLDKCSLCDAKRNELDGAEAAIIPVSDHSIQIFDGNSDH
GSFSSEMVVRPKVRKQNSEGNLERRKRSQSDDSKHGTSRQKKLSDGQWSVNSPFLMTRTE
KLSKESRCKAAHTASASKGAKQAEGKKKATELLSCNLDEEDDLWEDFEELKKSCASLGKD
DDSSECSEGEWSPTWTSDSAVDKEQSSNDESWETLPGLDEPEHEIRSSSSSSLDDVPELN
FHSEEQASLEEGEIPWLPYQEEMDSSSDDDTDGMSQFLHPGLFMLDGNNNFEDDSSMSED
FDAEWRLLDEFGEGFGVAQAFSYVDPQMLTYMALEERLAQAMEAALAHLESLAIDVEQAH
PPATEEVIDCLPQITVLEDHHGQEQCCAICCCEYMKDEIATELPCRHVFHKSCVTRWLQK
AGTCPVCRHVLSPALPDSAVATTFVLDHDTPPSTHSAAGTR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaagcaggcaagccagcctggcccaaaccagcaggaggctatcagacaatc
acaggaaagagatacggaagaagacatgcttacatcagttttcgtccaaccttggccaaa
gaagaaaatgcatccaaagagaacagcgtggagtgtggaggaatggagatgaacagtgtg
cacaaggagaatgctttatcatcaactgaggccatcagctcaacattacacactatattc
cctgcagcaaataattcagttgtgccagaaattaacagaacaacaatattcaaggaaggt
tctggcaggaaaaatgcagtgtcaaagaaagctgctgacgctgctggttgctcgtctcaa
gtgttggaggatgagcaaactgggtccaataatgctgagaatggttccaaaccaaagaaa
aattcagaggcctgtgctttgccaaccctggaagataatgaaacatgtcctagaagacca
ggtggactgggttttgtaaatattgactcttatgagccagatagcaatggtgggaaggaa
gatgacctatctgtggactcatcaataggaatgcgtcctggacttcagaagcaattagac
aacatgatttgtgagttagagaaggaatttgactatctcagtggtctacactcctacttg
tacacaaagtcatgtgaggaagttgaactggtgcccaaaaatgggtgctgtgggacagac
cttgaagaatccaatgaaagcaatagaatgtttaaggggagattgtgtaggctaactgag
gacagtttggataaatgtagcctatgtgatgcgaagcgaaatgagttagatggtgctgag
gcagccatcatcccagtgagtgatcacagcattcagatctttgatgggaacagtgaccat
gggtcattctcttcagagatggtggtgagaccaaaagtaaggaagcaaaatagtgaaggc
aacctagagcgaagaaagcgctctcagtcagatgactcaaaacatgggaccagcagacaa
aagaaactttcggatggccaatggagtgtgaatagccccttcttaatgactcgcacagaa
aaactgagcaaggaatcccgatgtaaagctgcacatactgcatctgccagtaaaggagca
aagcaagctgaaggaaaaaagaaagcaacagagttgctaagttgtaatcttgacgaagag
gatgacctctgggaagattttgaagaactcaaaaagagttgtgcatccttaggcaaggat
gatgatagttctgaatgcagtgaaggagaatggtctcctacctggacctctgattctgct
gtggacaaggagcagtcctccaatgatgaaagctgggagacactgcctggattggatgaa
ccagaacatgagattcggagcagcagcagtagcagcttggatgatgttccagagctcaac
tttcattctgaagagcaagcatccttagaagagggagaaatcccttggcttccctaccaa
gaggaaatggatagcagcagtgatgacgatacagacggaatgagtcagtttcttcacccg
ggtctttttatgttagatgggaacaacaactttgaagatgattcaagtatgagcgaagat
tttgatgctgagtggagattactagatgaatttggtgaaggttttggagtggctcaagct
ttttcctatgtggacccacagatgcttacttatatggctcttgaagagcggttagctcag
gctatggaggctgccctggctcatcttgagtctttggctattgatgttgaacaagctcac
cccccagccactgaagaagtcattgattgtctgccacagattacagtcctggaagatcac
cacggccaggaacagtgttgcgccatctgctgctgtgaatatatgaaagatgaaatagca
acagaacttccctgtcgtcatgtatttcataaatcctgtgtgacccgatggttacaaaag
gcaggaacatgtccggtgtgccgccatgtcctgtcccctgctctccctgactccgctgtg
gctacaacctttgtgttggatcacgacactcctccatccacccacagcgcggcaggaaca
cggtga
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