Polyodon spathula (Mississippi paddlefish): 121315968
Help
Entry
121315968 CDS
T07273
Name
(RefSeq) prospero homeobox protein 1-like
KO
K20211
prospero homeobox 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315968
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
121315968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPD
Metal_resist
NifQ
Nop25
Motif
Other DBs
NCBI-GeneID:
121315968
NCBI-ProteinID:
XP_041106545
LinkDB
All DBs
Position
5:41156203..41188617
Genome browser
AA seq
737 aa
AA seq
DB search
MPDHDSAALLSRQTKRRRVDIGVKRTVGTASVVFGKGRTTLFSAMNPHGSEQDVECSVVQ
HADGEKSNVLRKLLKRANSYEDAMIPFPGATIISQLLKNNMTKNGGTEPSFLGSGLSSTG
SEIQQEDVCSNSSRESPQECLSPFSRPTMSQFDIERLSDEHLRAKRARVENIIRGMSHSP
SVALRGNENDRDGAPQPPSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK
LQLEDMQKQLRQLQEKFYQIYDSTDSENEEDGNLSEDSMHSDGMGHQAQDFVPDRSDNEM
SDLDPGHFIDRARALIRQQAVVTENPKRDSQRGKDQGPASMHTEGKQLAETLKQELNTAM
SQVVDTVVKVFSKPVPQVFPPLQMPQARFAVNGENPNFHTTNHRLQCFGDIIIPNPQDTF
ANMQVPSSNDQTEALPLVVRKNSSDQSSSAPTPVGHHHHHPSLHPSPLSATVGFGSPSFR
HPFPLPLMGYPFQNPLSTPSGSYSGKERASPESLDLSRETTSLRTKMSSSHHMNHRSCSP
SYPGSTTEGLSLSLIKSECGDLQDMAEISPYSGSTIQEGLSPNHLKKAKLMFFYTRYPSS
NMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELNVTRDCE
LYRALNMHYNKANDFEVPERFLEVARITLREFFNAIVAGKDVDPSWKKAIYKVICKLDSE
VPDIFKSPNCLQELLHE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccatgacagtgcagccctcttaagcagacaaaccaagagaagaagagttgac
attggagtgaaaaggactgtagggacagcatctgtggttttcggtaaaggaagaacaacc
ttattcagtgccatgaatccccacggttcagagcaggacgtcgagtgttcagtggtgcag
catgcagatggggagaagtcaaacgtgctccgcaagctgctgaagagggcaaactcgtac
gaagatgccatgatcccttttcctggagctactatcatttcccagctgctgaaaaataac
atgaccaaaaatggtggcacagagcccagctttctaggcagtgggctctcaagcacgggc
tcagagattcagcaggaggatgtctgcagtaactcttcacgagaaagcccccaagagtgt
ctttccccattcagcaggccgaccatgagccagtttgatatagagcgtcttagtgatgag
cacctgagagccaagcgggccagagtggagaacataatccgtggtatgagccactctccc
agcgttgcgctacgtggaaatgagaatgacagagatggggcgccacagccccccagcccc
cgggagagttacagggaaaacaagcgcaaacagaagctgccccagcagcagcaacagagc
ttccagcagctggtttcagccagaaaggagcagaaacacgaggagcgcaggcagctgaaa
ctgcagctggaggacatgcagaagcagctgcggcagcttcaagagaagttctaccaaatt
tatgacagcacagattcagaaaacgaagaagatggtaacttgtctgaagacagcatgcac
tcagatggcatgggccaccaggcccaagactttgtgcctgaccgatcagacaacgaaatg
tccgacttggacccagggcatttcattgaccgtgcacgtgccctcattaggcaacaggca
gtggtgacagaaaatcctaaaagagacagccagagagggaaagaccaagggccagcctcc
atgcacacggaaggcaagcagctggctgagacattgaaacaggaactgaacactgccatg
tcccaggtagtggacacagtggttaaggtcttctcaaagcctgttcctcaggtcttccca
cccctccagatgcctcaagcccggtttgctgtcaatggagagaacccaaacttccacacc
actaaccaccggttgcagtgctttggcgatatcatcattcccaacccacaagacactttt
gccaacatgcaggtgcctagctccaatgaccagacagaagcactgcccctggtggttcga
aagaactcatccgaccaatcatcctccgctcccacccctgttggccatcaccatcaccac
ccttcactgcatccgtctccactgtcagccactgtgggctttggctctccttctttccgc
caccccttcccccttccactcatgggctacccatttcagaaccctttaagcaccccttcc
ggatcctattcgggcaaagagagggcatctccagaatcattggacttgtccagggagacc
actagcctacggaccaagatgtcatctagtcatcacatgaaccaccgatcgtgctcgcct
tcctacccaggcagcacaactgaaggcctgtctttgtccctcataaagtctgaatgcgga
gaccttcaggacatggcagagatttcaccttattcaggaagtacaattcaggaaggactt
tcaccgaatcacctaaaaaaggcaaagctgatgttcttttacaccagatacccaagctcc
aacatgctcaagatgttcttctctgatgtgaagttcaacagatgtatcacctctcagctc
atcaagtggttcagcaactttcgagagttctactacattcagatggagaagtttgcacgg
caggcgatcaatgatggtgtcacaggctcagaggaactgaatgtcactcgggactgtgag
ctgtacagggccctcaacatgcactacaacaaggcaaatgactttgaggttccggagcga
ttcctggaagtggctcggatcacgttacgggagtttttcaatgccattgttgcaggcaaa
gatgttgatccttcctggaagaaggccatatacaaggtcatctgcaagctggacagtgaa
gtccctgacattttcaaatcccccaactgtcttcaagaacttctgcatgagtaa
DBGET
integrated database retrieval system
