Polyodon spathula (Mississippi paddlefish): 121315977
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Entry
121315977 CDS
T07273
Name
(RefSeq) transforming growth factor beta-2 proprotein-like
KO
K13376
transforming growth factor beta-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04068
FoxO signaling pathway
pspa04110
Cell cycle
pspa04218
Cellular senescence
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121315977
04350 TGF-beta signaling pathway
121315977
04068 FoxO signaling pathway
121315977
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121315977
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121315977
04218 Cellular senescence
121315977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121315977
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121315977
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121315977
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121315977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
121315977
NCBI-ProteinID:
XP_041106566
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Position
5:43515209..43555623
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AA seq
408 aa
AA seq
DB search
MNYYILSIFLTLDLATVAISLSTCSTLDMDQFMKKRIEAIRGQILSKLKLSSPPEHYPDP
EEVSQEVVAIYNSTRDLLLEKANERAATCERERSEEEYYAKEVYKIDMFPLYSSGNYISA
NYYNPYFRRLKFDVSSMEKNASNLVKAELRVFRLQNPKARVSEQRIELYQIVGHKDLTSP
TQRYIDSKVVRTRAEGEWLSFDVTEAVSEWLLHRDRNNGFKISLHCPCCTFVPSNNYIIP
NKSEELETRFAGIDDNYSSDLKVFKKKFNGKTPHLLLMLLPSYRLESQQSGRRKKRALDA
AYCSRNIQDNCCLRPLYIDFKRDLDWKWIHEPKGYNANFCAGACPYLWSADTQHSKVLSL
YNTKNPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaactactatattttgagcatttttctaacgctggatttagccacggtggctatcagc
ctgtctacctgcagtaccctggatatggaccagttcatgaagaagcggatcgaggcaata
agggggcagatcctgagcaaattgaagctctctagcccacctgaacactaccctgatccc
gaggaagtgtcacaggaggttgtcgccatctataacagcaccagggacctgttgctggag
aaagccaacgagagggctgcgacttgcgaaagggaaaggagcgaggaagagtattatgct
aaggaggtttacaagatagacatgtttcccctttattcatctggaaattacatctctgca
aattattacaatccttacttcaggcgcctcaagtttgatgtttcatcaatggagaaaaac
gcatcaaatttggtgaaggcagaacttagagtttttcgattacaaaatccaaaggcaaga
gtatctgaacagcgaattgaactttatcagatcgtaggccacaaagatctaacgtcaccg
acccagcgctacattgacagtaaggtagtgagaacaagagcggaaggggaatggctgtct
tttgatgttacagaagctgtgagtgaatggcttcttcacagagatagaaacaatggattc
aagataagcttgcattgcccgtgttgtacatttgtaccttcaaacaattacatcatacca
aataagagtgaagaactagagacaagatttgcaggaattgacgataactatagcagtgat
ttgaaagtattcaagaagaaattcaatgggaaaactcctcatctcttactgatgctgcta
ccatcctataggcttgagtctcaacaaagtggtcgaaggaagaaacgtgccttagatgct
gcatattgttctaggaatatacaggacaactgctgcttgcgcccattatatattgacttt
aagagggatcttgattggaaatggattcacgaacccaaaggatataatgccaatttctgt
gcaggggcctgtccatatttatggagtgcagatactcaacatagcaaggtgctcagttta
tataacacgaaaaatccagaagcctctgcatctccatgctgtgtatctcaagatttagaa
cctcttactatcctgtattatatcggaaaaactcccaaaatcgaacagttgtcaaatatg
attgtcaagtcttgcaagtgcagttaa
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