Polyodon spathula (Mississippi paddlefish): 121316010
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Entry
121316010 CDS
T07273
Name
(RefSeq) EMILIN-1-like
KO
K24246
emilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121316010
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
121316010
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Ortholog
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GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
DUF948
DUF1664
Col_cuticle_N
Exonuc_VII_L
BLOC1_2
SR_plectin_7
ATG17_like
Motif
Other DBs
NCBI-GeneID:
121316010
NCBI-ProteinID:
XP_041106621
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All DBs
Position
5:complement(48747181..48823972)
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AA seq
1096 aa
AA seq
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MSGFVPHLLFSFFILLGPVWSASYPQRYNLYMGQRQTTQPQQPSVLRASNRHRNYCAYVV
TRTVSCMVEDGVETYVKPDYQPCSWGSIQCSRIVTYRTYMKPRYKVAYKIVTEMEWKCCY
GYSGDDCSEGPTGGQSQGTHISTVMPRPKPVRPGQTGGNSGNVQMGGEGRPGSDKVKHLE
SKVQSLTKELHDLQSTLRGMNEKFHEEIRKTLLTALNGKQPADAAHPEMKETLSDIQRTI
QHLDNRIQVHDRELNYLNNKSQTTGEGGENLIEYSDTKMNQKLTDLKGEVMKDLEKRLQQ
SCSACQSQVVVLRKQQEEDRDRIRGLEKLINSVDQRNKQVMDIVQKHVSSSSNQPLRDCC
AQVDQIEHKVSDVDRKLHSVSEAYDVLNGRLDNEFEKDDILNRKEKTNALLEDLESRLNM
TERNIEEHCLFVQTELKGYIHKEINDLRNEFNDRFDENGAKISNIVQNLDSLKDIIVDHG
KGLDKVFILTSDMENQLTSAVNSCAEICVNSGPPHPEDDDSKMSDVVKHLEWKVIVNEGE
IKNFGNKIKNLSISGDLLRNTVVDIGHDVQKLKTLTGPNGEHINRIVTNIENLEKELDYN
TLTSLTICSSVENQLVSLRNETEDYLDKLAVDLNNIRTRVDSEDTTCAQICSNLQEEVGK
LKEEVEKCSGQCKVVLKTPDGGQAGGDDLNQQKPLDGHSVIGGTSSVNLKSIQRELSEVI
LTFNSINDTLKGLEHTVQKHTSVIHDLGTTKDKIISEINKIQQEVNEHIEDSKGRFDHVS
KEIHRFGNNFMVEMGECKQSSDGLEKRISKMENLCGKLDTVSGSLEKIKDGLNKHVSSLW
NCVHGLNSTVITHSGYLDTIQNTQLDGINQQLNLLNSSMLTLFKEFQDFTLQDFMGLPGP
LGPQGERGFQGPPGPQGPPGRDGATGRPGEQGPMGPPGIRGEQGLPGLDASVPRLSFSAA
LTYPQVDAGTIIFDKVLVNDGHFYDPSTGIFKAPYDGRYFFSAILTGHKNEKIEAVLSKS
NYGIARVDSAGYQPEGLENKPVAETKPIPGSLAVFNIILPLKTGDTVCIDLVMGKLAHSD
EPLTIFNGALVYEDDV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttgtcccacatttacttttctccttttttattcttttgggaccggtatgg
agtgcatcatacccccagaggtacaacctttatatggggcagcgccagaccacacagccc
cagcagccgagtgtgttgagggcttccaacagacacaggaactactgtgcatatgtagta
actcgaacagtgagctgcatggttgaggacggtgtagagacctatgtgaaaccagactac
cagccgtgctcctgggggtcgattcagtgctctcgcatagtaacgtatcgaacatatatg
aaacctaggtacaaagtagcttacaagatagttactgagatggagtggaagtgttgttat
ggttactcaggagatgactgcagcgaaggacccacaggaggccagtcacaagggacccat
atctccacagttatgccccggcccaaaccagtacgtccaggacagactggcggcaactct
gggaatgtacagatgggaggagaaggaagacctggctctgacaaggtgaaacacttggaa
agcaaggtccagagtctgaccaaagaactccatgacctccagtccaccctgcgagggatg
aacgaaaagtttcatgaggagattcgcaagaccctattgacagcgctcaatggcaagcag
ccagctgatgctgcacacccagagatgaaggaaaccctcagtgacattcagagaacaata
cagcatcttgacaaccgtatccaggtgcatgatagagagctgaactacctgaacaacaaa
tctcagacaactggtgaagggggggaaaacttaattgaatattcagacactaaaatgaac
caaaaactcacagacctgaagggcgaagtcatgaaagacttggaaaaaagactccaacag
tcttgctcggcctgccaatcgcaagtggtggtcttgaggaagcagcaggaggaagacaga
gacaggatccgggggctagagaaactcattaactctgtggatcagcggaacaagcaggtg
atggacattgtgcagaaacacgtgtcaagttcatctaaccagcctttaagggactgctgt
gcccaagtggaccagatcgaacataaagtcagtgatgttgacaggaaactgcattctgtc
tctgaggcttatgatgttttgaacgggcggcttgacaatgagtttgagaaggacgacatt
ttgaatagaaaagagaaaacaaatgcccttctagaagatttagaaagccgcctaaacatg
acagagaggaacatagaagagcattgtctctttgtccaaaccgagctaaagggttatatc
cataaggagataaatgacttgaggaatgagtttaatgataggtttgatgaaaatggagcc
aaaatatctaacatagttcaaaatttggacagcttaaaggacataattgttgaccatggc
aaaggccttgataaagtcttcatcctcacgtctgacatggagaatcaattgacttcagca
gttaacagttgtgctgaaatctgtgtcaacagtggtcctccacatccagaagatgatgac
tctaaaatgtcagatgtagtgaaacatttggagtggaaggtcattgtaaatgaaggagag
attaaaaactttggaaacaagataaagaacctctcaatctctggagatttactgaggaac
acagtggtagatattggccatgatgtacagaaactgaagaccttgacggggcccaatggt
gaacatatcaataggattgttactaacatagagaaccttgagaaagaattagattacaat
accttaacaagtcttaccatttgcagctctgtggaaaaccaactagtttctctgcggaat
gagacagaagactacttggataaactggctgtggatctgaataacatacgtaccagagtg
gattctgaggacacaacttgtgcccaaatatgctcaaacctacaggaagaagtcgggaaa
ctaaaggaagaagtagaaaaatgcagcggacaatgtaaggtagtcttgaagacgccagat
ggaggccaggcaggaggggatgatctaaaccagcagaaacctttagatggacacagtgtt
atcggcgggacttccagcgtcaacttgaagtctattcaaagagagctttcagaggtcatt
ctgacgttcaactccattaatgacacactcaaaggccttgaacatacagtgcagaagcac
actagtgttatccatgacctgggcaccactaaggacaaaatcatctctgagatcaacaaa
atccagcaggaggtgaacgagcacattgaggacagcaaaggcaggttcgaccatgtcagt
aaggagatccatcggtttggtaacaacttcatggtagaaatgggtgagtgtaaacagtca
tctgacggcctggaaaagaggatttccaagatggagaacctttgcggaaagcttgacaca
gtgtcaggcagcttggaaaaaattaaggatggcctgaacaaacatgtgtccagcctctgg
aactgtgtccatgggttaaatagcacagtcattacccacagtggctacttggacactatt
cagaatacacagctggatggaattaatcaacaactaaacttattgaactcctccatgctc
accttattcaaggagttccaggactttacccttcaggactttatgggacttccaggtcca
ttaggcccccagggagagagaggtttccaaggaccccctggaccacaagggcccccaggc
agggatggagccacaggcagaccaggagaacaaggaccaatgggacccccgggtatcaga
ggcgaacaaggtcttcctggtttagatgcatcggttccaaggctttcattttcagcagct
ctgacatacccacaggtggatgctggaacaatcattttcgataaggtcttagtgaacgac
ggtcacttctatgatccttctactggaatctttaaggctccttatgatgggcgatacttc
ttcagtgccatcttgacaggccacaagaatgagaagattgaagccgtgctctccaaatcc
aactatgggattgcacgtgtggactccgccggataccagcctgaagggctggagaacaaa
cctgtggctgaaaccaagcccatcccaggctccctagctgtcttcaacatcatcctcccg
ctgaagactggagatacggtctgcattgacctggtcatgggcaaactggcacactctgat
gaaccgctcacaattttcaacggggcacttgtatatgaagatgatgtgtaa
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