Polyodon spathula (Mississippi paddlefish): 121316023
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Entry
121316023 CDS
T07273
Symbol
ints9
Name
(RefSeq) integrator complex subunit 9
KO
K13146
integrator complex subunit 9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121316023 (ints9)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121316023 (ints9)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IntS9_C
Lactamase_B_6
Beta-Casp
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
121316023
NCBI-ProteinID:
XP_041106638
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Position
5:49985103..50058412
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AA seq
659 aa
AA seq
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MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSALNFLPLPLVHSPRLAKLPGWVSKDG
NTFLEKELKECAGRVFVDSLPEFCLPERELLDLSTIDVILISNYHCMMALPYITEHTGFT
GTVYATEPTLQIGRLLMEELVNFIERVPKAQSATCWKNKEIQRLLPAPLKDTVEVSTWKS
CYTMQEVNSALSKVQLVGYSQKIELFGAVQITPLSSGYSLGSSNWIIQSHYEKVSYVSGS
SLLTTHPQPMDQSSLKNSDVLILTGLTQIPTANPDGMLGEFCSNLAMTVRTGGNVLVPCY
SSGVIYDLLECLYQFIDSASLTTIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
PFPHAELIQTNKLKHYPSVHGDFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSINTI
IFTEPDFSYLEALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYVRPPP
AQSHRSDLMLDCQPPTMPYRRCSVLSLPFRRRYERIELLPELADSLVPSEIKPGISVATV
TAVLHTKDNKHVLRPTLKLAPAPPPSKKRKRVLEEPPEHRAPKPLLSGAVPIEQFLATLQ
KHGITEVKVEDTPDGHILHLQDEDTLIQLEEDSTHIICDNNEILRATLRDLVLRFLQKF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtactgcctgtctggtcatcccacactgccctgcaatgtcctcaagttcaag
tcgacgaccatcatgctggactgtgggctagatatgacctcggccctgaatttcctaccg
ctgcctttggtgcacagcccaagactagcaaagctacctggatgggtttcaaaggatgga
aacacttttttggaaaaggaactaaaggaatgtgcgggtcgggtttttgtggactccctc
ccagaattctgtctgccagagagggagttactggatctgtccaccattgacgtaatccta
atttccaactaccactgcatgatggctctgccatacatcacagagcacactggattcact
ggcaccgtgtacgccacagagcccactctgcagataggaaggctgcttatggaagagctt
gtgaattttattgagagggttccaaaggctcagtccgccacgtgttggaagaacaaggaa
atacaaaggcttctcccagcacccctgaaggatacagtagaagtgtcgacctggaagagc
tgctacacaatgcaggaagtgaactctgccctcagcaaggttcagctggttggatactca
cagaaaattgaactgtttggtgctgtgcagatcaccccacttagctctggctattcattg
ggcagctccaactggatcatccaatcacattacgagaaggtatcctatgtgtctggatct
tcactccttactacacatccacagcccatggaccagagctccctaaagaacagtgatgtt
cttattctgactggcctgacccagatccctacagccaaccctgatggcatgctgggagag
ttctgcagcaacctagcaatgactgtgcgtactggagggaacgtgttggttccctgttat
tcctccggagtgatctatgacctactcgagtgtctctaccaattcatcgactcagctagc
ctgaccaccatccctttctacttcatctcccctgtcgcaaacagctcccttgagttctca
cagatcttcgctgaatggctctgtcacaataagcagtcaaaggtctacctcccagagcct
cccttccctcatgctgagttgattcagacaaacaagctgaagcactaccccagtgtgcat
ggagatttcagcaatgacttcaagcagccatgcgtggtgttcaccgggcacccctctctg
cgcttcggagacgtggtgcactttatggagttgtggggaaagtccagcatcaacaccatc
atcttcacagagcctgacttctcctatctcgaagccctggccccataccagcccctcgcc
atgaagtgtgtctactgtcccattgacacccgcctaaacttcatccaggtctccaagctg
ctgaaggaggttcagcccctccatgtggtgtgcccggaacagtatgtccggcctccgcct
gctcagtcccaccgttcagatctgatgctggactgccagccacctaccatgccataccgc
cgctgctctgtgctcagtctgcccttcagaaggcgctatgagaggattgagctgctgcct
gagcttgccgattcactagttccctcagagattaaaccgggcatctctgtggcaactgtc
accgcggtgctgcacacaaaggacaacaaacacgtgctgcggcctaccctgaagctggca
ccagctccccccccctccaagaagaggaagcgtgttttggaggagccacctgaacacaga
gcccccaaacccctgctgagtggtgcagtccccatcgagcagttcctggccacactccaa
aagcatgggatcacagaagtgaaggtggaggacactcctgatggacacatcctccacctg
caggatgaagacaccctgatccagctggaagaagactccactcacatcatctgtgacaac
aatgagatactgcgagccactctcagggatcttgtacttcgattcctacagaaattctga
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