Polyodon spathula (Mississippi paddlefish): 121316055
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Entry
121316055 CDS
T07273
Name
(RefSeq) serologically defined colon cancer antigen 8 homolog isoform X1
KO
K16488
serologically defined colon cancer antigen 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121316055
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121316055
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121316055
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121316055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Sec10_N
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
121316055
NCBI-ProteinID:
XP_041106708
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All DBs
Position
5:54562860..54710485
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AA seq
735 aa
AA seq
DB search
MLLMSHSWDLQTEIDESLEEYKKGLRDRASRSMTQLKSVLEEQPSAEAAFSPKKGSVMAH
GSPRITGGWREGDLKMTWKDLQHSHAVNQLRSLLRQQERESAPSTPTSRRKTSPKKPSEK
GDADLPAVQDLVPIINSQSEYIQHLEAEVMFCKDELSGMKQRIGVVILENDKLQEELKSK
TVEDTLKDYTILDTSTNALEPYLTGRTVPRALDTRQHSQSQQQPRSTPTQPPASNSPTEA
LKWQMELEKLKLLYQAKTETVEAQVMSLRKDLAISQKDCEEMKGRLRHQESVAAMFSGIR
VGGLCLKCAQHEAVLAKTHTNVHMQAIERLTRERDELMAVLSSQRSNQGEMQQRESSAYQ
QVKQAVEMAEEANLEKTQALIQCEQLKKEILRQNGRLQMELAAEQEKITKAKETAREEMM
KEKEELAASVMSLSVKVASLEGQLERLTRENNSVANQLEEAQKQLISQDLDISKVCGELR
YQLNQSQLKRDEAEKELREFRTKTTRDLELREQEIEKLHLELSETKQRLERAQQDSARAK
DESLRLTELLGRSEHQLHLTRLEKEAAVCCRSDDVKALTFQAQHREQELIQKMQQMEAQH
EKSVNELEALLDSQNTLIGKLKDECRILGTKLEHVTEKNRSEVGQLSQENMYLHDTVEKL
QSRSDRMEEQCIQHGRMHERMKQRLGQLDQHCQSSAQHVMELLNKQNQLLKERHTLTEEM
QHLRIQVPCLSRIGS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttattaatgagtcattcctgggatttacagactgagattgatgagtctttggaagaa
tataagaagggtctgagagacagagccagcagaagcatgacacagctgaagagtgtgtta
gaagagcagccctctgcagaagctgctttttcgccaaagaaggggtctgtaatggctcac
ggcagtcctcggattacaggcgggtggagagagggagacttgaaaatgacctggaaagac
ctacaacacagccacgcagtcaatcagctgagatcgttgcttcgtcaacaagaacgggaa
tctgcacccagcacgcctacaagtagaagaaaaacatcacccaagaagccttcagaaaaa
ggagatgctgatttgccagctgttcaagatctcgtccctattattaacagccagtccgaa
tacattcagcatctggaggcggaagtcatgttttgcaaggacgagctctctgggatgaaa
caacggatcggggtggtgattcttgaaaatgacaaactgcaagaagaattgaagtcaaaa
actgttgaggacactttaaaagactataccatcctggatacctcgacaaacgccctggaa
ccctatctgactggaagaactgtccccagagctctggataccagacagcactctcagagc
cagcagcagccccgatccactcctacacagcctccagcatccaacagtccgacagaggct
ctgaaatggcaaatggaactggagaagttaaaactactctatcaagcaaaaacagaaacc
gtagaagcgcaggtgatgtcattgagaaaagatttagccatttcacagaaggactgtgaa
gaaatgaaaggaagactgaggcatcaggagtcagtggcagccatgttcagtgggatccgt
gtcggtggcttgtgtttgaagtgtgcccaacatgaagctgttttggcaaagacccataca
aatgtacatatgcaagcaatagaaagattaacaagagaaagagatgaactgatggccgta
ttatcctcccagaggagcaatcagggtgaaatgcaacaaagagaatccagcgcctatcaa
caggtcaaacaggctgtggagatggcagaagaagccaacctggaaaaaacacaggctttg
atccaatgtgagcagttaaaaaaagagatactgaggcaaaatggtcgtcttcaaatggaa
ttggctgctgaacaagagaagattaccaaagccaaggagactgcacgagaggaaatgatg
aaggaaaaagaagagttagcggcatctgtgatgtcactatccgtaaaggtggccagtctt
gaaggacagcttgagaggttaaccagagaaaataattcagtagccaatcagctggaggaa
gctcaaaagcagctcatttctcaggacttggatatcagtaaggtgtgtggagagctgcgg
tatcagttaaaccaatctcaattgaagagggatgaggcagagaaagagctccgggaattc
agaactaaaaccacgagggatcttgaactccgagaacaggaaatagagaagctgcacctg
gagctgagcgaaaccaagcagcgtctggaacgtgcccagcaggactcggcccgcgccaag
gatgagtccctgagactgacagagctgctgggcagatctgagcaccaactgcacctcacc
aggctggagaaagaggctgctgtctgctgccgcagcgacgacgtgaaggccttgaccttc
caggcccaacatcgtgagcaagagctgatacagaagatgcagcaaatggaggctcagcat
gagaagagcgttaacgaactggaagcattgttagattcccaaaatactttgataggaaaa
ctgaaggacgagtgccgaatcctgggtacaaagctggaacatgtgacagagaagaacagg
tcagaagttggccagctttcccaggagaacatgtacctccatgatactgtggagaaactg
cagtctcgcagcgacaggatggaagagcagtgtattcagcatgggcggatgcacgagaga
atgaaacaaaggctagggcagctagatcagcattgccagtcgagcgctcagcacgtgatg
gaattgctgaacaagcagaaccagctgctgaaggagaggcacactctgactgaggagatg
cagcacctcaggatacaggtgccttgtttatcaagaattggaagctga
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