Polyodon spathula (Mississippi paddlefish): 121316058
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Entry
121316058 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 18-like isoform X1
KO
K23196
zinc finger and BTB domain-containing protein 18/42
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121316058
03036 Chromosome and associated proteins [BR:
pspa03036
]
121316058
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121316058
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121316058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-C2H2_jaz
zf-met
CpXC
zf-C2H2_15
zf_C2H2_10
BTB_BTBDG
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121316058
NCBI-ProteinID:
XP_041106715
LinkDB
All DBs
Position
5:54973566..54979594
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AA seq
566 aa
AA seq
DB search
MHTAGYEDSMEFPDHSRHLLQCLSEQRHQGFLCDSTVLVGDAQFRAHRAVLASCSVYFHL
FYKDQLDKKDIVHLNSDIVTAPAFALLLEFMYKGKLQFKALPIEDVLAAASYLHMYDIVK
VCKKKLKEKATAEADSTKREEDASSCSDKVESYSEGSSVNPVCELLPSDAEDDDSESNKR
DFLPEPGNMWMRLPSDSVGAPKTGGSSSREAETHTAAAGKTETATSPCSSTGSLSQRSVT
SRRVSADADCVLDLSVKSGLAGGGGESLPGNSPYLCSTVAMAPDSLQNSLVQVKVEKEGA
SDEEDLGNGNYEMEHSGGAATKKALPSTNGRGLHLHHHHNHHHSRLHYETTASHLSAIRE
ASLSSELDREDKASEDDEMLSSESERPQAEATSIDNSLLPYVSNMLSAPHSQIFMCPLCN
KVFPSPHILQIHLSTHFREQEGVRTKPASDVNVPTCSICGKTFSCMYTLKRHERTHSGEK
PYTCAQCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFTQSGDLYRHIRKFHCELVNSF
SVKSEALNLPAVRDWAIEDSSQELWK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagcaggttatgaagacagcatggagtttccagaccacagcagacatttgcta
cagtgtctgagtgagcagagacatcagggttttctttgtgattccactgtgctggttggc
gatgcccagttccgagcccaccgtgctgtgctggcttcgtgcagcgtgtacttccacctc
ttttacaaggaccagctggacaaaaaggacattgttcatctcaacagtgacattgttaca
gccccagctttcgctctcctgcttgaattcatgtacaaggggaaactccagttcaaagcc
ctgcccattgaggacgtgctggctgctgccagctacctccacatgtatgatatagtcaag
gtctgcaaaaagaaactgaaagagaaagccacagccgaggcagacagtaccaagagggaa
gaagatgcctccagctgctctgacaaagtggagagctactcggaaggcagcagtgtgaac
ccagtgtgcgagctcctacccagcgacgcagaggatgatgactccgaaagcaacaagaga
gactttctccccgagcctgggaacatgtggatgaggttgccctctgactctgtgggtgcc
cctaagactggtggcagcagcagcagggaggcagagacacacacggcggcagctggaaaa
acagaaactgccaccagtccctgcagttcgactgggtctttgtctcaaaggtctgtcact
tccaggagggtgtcggcagatgcagattgtgtgctggacttgtcagtcaagtcaggcctg
gcagggggtggtggggagagcctccctggaaacagcccttacttatgtagcacagttgca
atggccccagacagtttgcagaacagcctggtccaggtaaaggtggagaaagaaggggct
tctgacgaggaggacttgggcaatggtaattatgagatggaacacagtggtggggcagcc
accaagaaggcactcccaagcaccaatggtagggggctccatctccaccaccaccacaac
caccatcacagccgactccattatgagaccactgcctctcacctttctgccatccgtgag
gcctccctgtccagtgagctagaccgtgaggacaaggcgagtgaggacgatgagatgcta
agctcagaaagtgaacggccccaagcagaggccaccagcatagacaacagcctgctgccc
tatgtctccaacatgctgagcgcaccccacagtcagatctttatgtgtcccctgtgcaac
aaagtcttccccagcccacacatcctgcagatccacctcagcacgcacttccgcgagcag
gagggtgtgcgcacaaagccggccagcgatgtcaacgtgccgacctgctccatctgtggc
aagactttctcatgcatgtacaccctcaagcggcacgaacggacccactcgggtgaaaag
ccctatacctgtgcccaatgtggtaaaagcttccagtactctcacaacctgagccggcac
gcagtggtgcacacccgtgaaaagccacacgcctgcaagtggtgtgagcgcaggttcacg
cagtcgggagacctgtaccgacatatccgcaagtttcactgtgagctggtgaactcattt
tcggttaaaagtgaagcactgaacttgcctgctgtcagggactgggctatagaggatagc
tctcaagaactctggaaataa
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